Cluster: C59.CMAG_1_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C59.CMAG_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C59_contig_2388 | C59_contig_2388_195 | 245259 | 246290 | + | 9.B.146.1.6 |
| pfam | C59_contig_2388 | C59_contig_2388_196 | 246299 | 247705 | + | Mur_ligase_C | Mur_ligase_M |
| TC | C59_contig_2388 | C59_contig_2388_197 | 247711 | 249417 | + | 2.A.103.1.1 |
| CAZyme | C59_contig_2388 | C59_contig_2388_198 | 249407 | 250537 | + | GT28 |
Gene ID: C59_contig_2388_195
Type: TC
Location: 245259 - 246290 (+)
Type: TC
Location: 245259 - 246290 (+)
Gene ID: C59_contig_2388_196
Type: pfam
Location: 246299 - 247705 (+)
Type: pfam
Location: 246299 - 247705 (+)
Gene ID: C59_contig_2388_197
Type: TC
Location: 247711 - 249417 (+)
Type: TC
Location: 247711 - 249417 (+)
Gene ID: C59_contig_2388_198
Type: CAZyme
Location: 249407 - 250537 (+)
Type: CAZyme
Location: 249407 - 250537 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.