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Cluster: C59.CMAG_1_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C59_contig_2388 C59_contig_2388_966 1132619 1133449 - 4.A.6.1.9
TC C59_contig_2388 C59_contig_2388_967 1133449 1134258 - 4.A.6.1.9
TC C59_contig_2388 C59_contig_2388_968 1134339 1134815 - 4.A.6.1.9
TC C59_contig_2388 C59_contig_2388_969 1134930 1135370 - 4.A.6.1.10
TF C59_contig_2388 C59_contig_2388_970 1135626 1136390 + HTH_DeoR
TF C59_contig_2388 C59_contig_2388_971 1136405 1137166 + HTH_DeoR
CAZyme C59_contig_2388 C59_contig_2388_972 1137268 1138431 - CE9
STP C59_contig_2388 C59_contig_2388_973 1138563 1139726 - SIS
TF C59_contig_2388 C59_contig_2388_974 1139920 1140651 - GntR
TC C59_contig_2388 C59_contig_2388_975 1140820 1141914 - 4.A.6.1.4
TC C59_contig_2388 C59_contig_2388_976 1141904 1142701 - 4.A.6.1.4
TC C59_contig_2388 C59_contig_2388_977 1142800 1143282 - 4.A.6.1.4
pfam C59_contig_2388 C59_contig_2388_978 1143368 1143652 - YajC
TC C59_contig_2388 C59_contig_2388_979 1143652 1144095 - 4.A.6.1.16
pfam C59_contig_2388 C59_contig_2388_980 1144559 1145248 + Flavodoxin_5
peptidase C59_contig_2388 C59_contig_2388_981 1145449 1146906 + M20.UPD
TC C59_contig_2388 C59_contig_2388_982 1147015 1147830 - 2.A.5.5.2
Gene ID: C59_contig_2388_966
Type: TC
Location: 1132619 - 1133449 (-)
Gene ID: C59_contig_2388_967
Type: TC
Location: 1133449 - 1134258 (-)
Gene ID: C59_contig_2388_968
Type: TC
Location: 1134339 - 1134815 (-)
Gene ID: C59_contig_2388_969
Type: TC
Location: 1134930 - 1135370 (-)
Gene ID: C59_contig_2388_970
Type: TF
Location: 1135626 - 1136390 (+)
Gene ID: C59_contig_2388_971
Type: TF
Location: 1136405 - 1137166 (+)
Gene ID: C59_contig_2388_972
Type: CAZyme
Location: 1137268 - 1138431 (-)
Gene ID: C59_contig_2388_973
Type: STP
Location: 1138563 - 1139726 (-)
Gene ID: C59_contig_2388_974
Type: TF
Location: 1139920 - 1140651 (-)
Gene ID: C59_contig_2388_975
Type: TC
Location: 1140820 - 1141914 (-)
Gene ID: C59_contig_2388_976
Type: TC
Location: 1141904 - 1142701 (-)
Gene ID: C59_contig_2388_977
Type: TC
Location: 1142800 - 1143282 (-)
Gene ID: C59_contig_2388_978
Type: pfam
Location: 1143368 - 1143652 (-)
Gene ID: C59_contig_2388_979
Type: TC
Location: 1143652 - 1144095 (-)
Gene ID: C59_contig_2388_980
Type: pfam
Location: 1144559 - 1145248 (+)
Gene ID: C59_contig_2388_981
Type: peptidase
Location: 1145449 - 1146906 (+)
Gene ID: C59_contig_2388_982
Type: TC
Location: 1147015 - 1147830 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C59_contig_2388_966 vegan > omnivore 1.43964 0.01057
C59_contig_2388_968 vegan > omnivore 1.33354 0.01057

🧭 Explore Read Mapping of CGC

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