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Cluster: C55.bin_4_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C55_contig_1544 C55_contig_1544_165 155181 156752 + 3.A.5.1.1
pfam C55_contig_1544 C55_contig_1544_166 156819 157586 + DUF915
CAZyme C55_contig_1544 C55_contig_1544_167 157693 158676 + CE7
pfam C55_contig_1544 C55_contig_1544_168 158870 159940 + Phage_integrase | Phage_int_SAM_1
pfam C55_contig_1544 C55_contig_1544_169 160119 160880 - ABC2_membrane_4
TC C55_contig_1544 C55_contig_1544_170 160882 161808 - 3.A.1.124.5
TC C55_contig_1544 C55_contig_1544_171 162265 162891 - 3.A.1.134.11
Gene ID: C55_contig_1544_165
Type: TC
Location: 155181 - 156752 (+)
Gene ID: C55_contig_1544_166
Type: pfam
Location: 156819 - 157586 (+)
Gene ID: C55_contig_1544_167
Type: CAZyme
Location: 157693 - 158676 (+)
Gene ID: C55_contig_1544_168
Type: pfam
Location: 158870 - 159940 (+)
Gene ID: C55_contig_1544_169
Type: pfam
Location: 160119 - 160880 (-)
Gene ID: C55_contig_1544_170
Type: TC
Location: 160882 - 161808 (-)
Gene ID: C55_contig_1544_171
Type: TC
Location: 162265 - 162891 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C55_contig_1544_165 vegan > omnivore 2.20040 0.00918
C55_contig_1544_165 vegetarian > omnivore 1.29284 0.00341

🧭 Explore Read Mapping of CGC

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