dbCAN Logo

Cluster: C54.bin_6_CGC98

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C54_scaffold_3399 C54_scaffold_3399_1663 2367240 2368469 + 2.A.1.7.11
CAZyme C54_scaffold_3399 C54_scaffold_3399_1664 2368504 2370216 + GH18
pfam C54_scaffold_3399 C54_scaffold_3399_1665 2370665 2371669 - TIG
pfam C54_scaffold_3399 C54_scaffold_3399_1666 2371705 2373399 - SusD_RagB | SusD-like_3
TC C54_scaffold_3399 C54_scaffold_3399_1667 2373414 2376191 - 1.B.14.6.1
pfam C54_scaffold_3399 C54_scaffold_3399_1668 2376226 2378190 - SusD_RagB
TC C54_scaffold_3399 C54_scaffold_3399_1669 2378202 2381357 - 1.B.14.6.1
CAZyme C54_scaffold_3399 C54_scaffold_3399_1670 2381851 2383899 - GH55_1
Gene ID: C54_scaffold_3399_1663
Type: TC
Location: 2367240 - 2368469 (+)
Gene ID: C54_scaffold_3399_1664
Type: CAZyme
Location: 2368504 - 2370216 (+)
Gene ID: C54_scaffold_3399_1665
Type: pfam
Location: 2370665 - 2371669 (-)
Gene ID: C54_scaffold_3399_1666
Type: pfam
Location: 2371705 - 2373399 (-)
Gene ID: C54_scaffold_3399_1667
Type: TC
Location: 2373414 - 2376191 (-)
Gene ID: C54_scaffold_3399_1668
Type: pfam
Location: 2376226 - 2378190 (-)
Gene ID: C54_scaffold_3399_1669
Type: TC
Location: 2378202 - 2381357 (-)
Gene ID: C54_scaffold_3399_1670
Type: CAZyme
Location: 2381851 - 2383899 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C54_scaffold_3399_1665 vegetarian > vegan 1.15235 0.00827
C54_scaffold_3399_1666 vegetarian > vegan 1.01743 0.00827
C54_scaffold_3399_1667 vegetarian > vegan 1.33681 0.00827
C54_scaffold_3399_1668 vegetarian > vegan 1.22180 0.00827
C54_scaffold_3399_1669 vegetarian > vegan 1.18032 0.00827

🧭 Explore Read Mapping of CGC

← Back to Cluster List