Cluster: C54.bin_6_CGC96
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: C54.bin_6
- CGC Family ID: CGCFAM_07727
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_1553 | 2233315 | 2236671 | + | CBM32 |
| TC | C54_scaffold_3399 | C54_scaffold_3399_1554 | 2236772 | 2238883 | + | 3.A.7.7.1 |
| TC | C54_scaffold_3399 | C54_scaffold_3399_1555 | 2238944 | 2240944 | + | 1.B.6.1.14 |
Gene ID: C54_scaffold_3399_1553
Type: CAZyme
Location: 2233315 - 2236671 (+)
Type: CAZyme
Location: 2233315 - 2236671 (+)
Gene ID: C54_scaffold_3399_1554
Type: TC
Location: 2236772 - 2238883 (+)
Type: TC
Location: 2236772 - 2238883 (+)
Gene ID: C54_scaffold_3399_1555
Type: TC
Location: 2238944 - 2240944 (+)
Type: TC
Location: 2238944 - 2240944 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C54_scaffold_3399_1555 | vegan > omnivore | 1.92476 | 0.01049 |
| C54_scaffold_3399_1555 | vegetarian > omnivore | 2.96749 | 0.00141 |
| C54_scaffold_3399_1555 | vegetarian > vegan | 1.04274 | 0.00827 |