Cluster: C54.bin_6_CGC94
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C54.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C54_scaffold_3399 | C54_scaffold_3399_1508 | 2180269 | 2181942 | - | 4.C.1.1.4 |
| pfam | C54_scaffold_3399 | C54_scaffold_3399_1509 | 2182029 | 2183348 | + | UPF0004 | Radical_SAM |
| pfam | C54_scaffold_3399 | C54_scaffold_3399_1510 | 2183366 | 2184268 | + | Lip_A_acyltrans |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_1511 | 2184261 | 2185277 | + | GT2 |
Gene ID: C54_scaffold_3399_1508
Type: TC
Location: 2180269 - 2181942 (-)
Type: TC
Location: 2180269 - 2181942 (-)
Gene ID: C54_scaffold_3399_1509
Type: pfam
Location: 2182029 - 2183348 (+)
Type: pfam
Location: 2182029 - 2183348 (+)
Gene ID: C54_scaffold_3399_1510
Type: pfam
Location: 2183366 - 2184268 (+)
Type: pfam
Location: 2183366 - 2184268 (+)
Gene ID: C54_scaffold_3399_1511
Type: CAZyme
Location: 2184261 - 2185277 (+)
Type: CAZyme
Location: 2184261 - 2185277 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C54_scaffold_3399_1510 | vegetarian > omnivore | 1.04767 | 0.00141 |