dbCAN HGM

Cluster: C54.bin_6_CGC90

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	C54_scaffold_3399	C54_scaffold_3399_1328	1917073	1920429	+	1.B.14.6.1
TC	C54_scaffold_3399	C54_scaffold_3399_1329	1920445	1922292	+	8.A.46.1.6
CAZyme	C54_scaffold_3399	C54_scaffold_3399_1330	1922327	1923421	+	GH105
CAZyme	C54_scaffold_3399	C54_scaffold_3399_1331	1923424	1925538	+	GH2
CAZyme	C54_scaffold_3399	C54_scaffold_3399_1332	1925588	1927120	+	GH109
pfam	C54_scaffold_3399	C54_scaffold_3399_1333	1927226	1929127	-	Thioredoxin \| AhpC-TSA \| Redoxin \| Thioredoxin_2 \| Thioredoxin_8
pfam	C54_scaffold_3399	C54_scaffold_3399_1334	1929258	1930322	+	Lipase_GDSL_3 \| GxDLY
CAZyme	C54_scaffold_3399	C54_scaffold_3399_1335	1930344	1932635	+	GH92
CAZyme	C54_scaffold_3399	C54_scaffold_3399_1336	1932635	1934149	+	GH20

Gene ID: C54_scaffold_3399_1328
Type: TC
Location: 1917073 - 1920429 (+)

Gene ID: C54_scaffold_3399_1329
Type: TC
Location: 1920445 - 1922292 (+)

Gene ID: C54_scaffold_3399_1330
Type: CAZyme
Location: 1922327 - 1923421 (+)

Gene ID: C54_scaffold_3399_1331
Type: CAZyme
Location: 1923424 - 1925538 (+)

Gene ID: C54_scaffold_3399_1332
Type: CAZyme
Location: 1925588 - 1927120 (+)

Gene ID: C54_scaffold_3399_1333
Type: pfam
Location: 1927226 - 1929127 (-)

Gene ID: C54_scaffold_3399_1334
Type: pfam
Location: 1929258 - 1930322 (+)

Gene ID: C54_scaffold_3399_1335
Type: CAZyme
Location: 1930344 - 1932635 (+)

Gene ID: C54_scaffold_3399_1336
Type: CAZyme
Location: 1932635 - 1934149 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
C54_scaffold_3399_1334	vegan > omnivore	1.25519	0.01049
C54_scaffold_3399_1335	vegetarian > omnivore	3.40804	0.00141
C54_scaffold_3399_1335	vegetarian > vegan	4.37177	0.00444
C54_scaffold_3399_1336	vegetarian > omnivore	1.26149	0.00141