Cluster: C54.bin_6_CGC87
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: C54.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_1161 | 1682797 | 1683909 | + | GH26 |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_1162 | 1683924 | 1685099 | + | GH130_1 |
| TC | C54_scaffold_3399 | C54_scaffold_3399_1163 | 1685087 | 1686472 | + | 2.A.2.3.6 |
Gene ID: C54_scaffold_3399_1161
Type: CAZyme
Location: 1682797 - 1683909 (+)
Type: CAZyme
Location: 1682797 - 1683909 (+)
Gene ID: C54_scaffold_3399_1162
Type: CAZyme
Location: 1683924 - 1685099 (+)
Type: CAZyme
Location: 1683924 - 1685099 (+)
Gene ID: C54_scaffold_3399_1163
Type: TC
Location: 1685087 - 1686472 (+)
Type: TC
Location: 1685087 - 1686472 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C54_scaffold_3399_1161 | vegan > omnivore | 1.33902 | 0.01049 |