dbCAN HGM

Cluster: C54.bin_6_CGC86

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	C54_scaffold_3399	C54_scaffold_3399_1142	1649845	1652847	+	GH3
CAZyme	C54_scaffold_3399	C54_scaffold_3399_1143	1652978	1656127	+	GH3
pfam	C54_scaffold_3399	C54_scaffold_3399_1144	1656245	1656874	-	OMP_b-brl
pfam	C54_scaffold_3399	C54_scaffold_3399_1145	1656915	1657547	-	DUF4136
TC	C54_scaffold_3399	C54_scaffold_3399_1146	1657843	1658850	-	8.A.5.1.3
TF	C54_scaffold_3399	C54_scaffold_3399_1147	1659076	1659963	+	HTH_AraC \| HTH_AraC
CAZyme	C54_scaffold_3399	C54_scaffold_3399_1148	1660129	1662726	+	GH3
TC	C54_scaffold_3399	C54_scaffold_3399_1149	1663069	1666206	+	1.B.14.6.1

Gene ID: C54_scaffold_3399_1142
Type: CAZyme
Location: 1649845 - 1652847 (+)

Gene ID: C54_scaffold_3399_1143
Type: CAZyme
Location: 1652978 - 1656127 (+)

Gene ID: C54_scaffold_3399_1144
Type: pfam
Location: 1656245 - 1656874 (-)

Gene ID: C54_scaffold_3399_1145
Type: pfam
Location: 1656915 - 1657547 (-)

Gene ID: C54_scaffold_3399_1146
Type: TC
Location: 1657843 - 1658850 (-)

Gene ID: C54_scaffold_3399_1147
Type: TF
Location: 1659076 - 1659963 (+)

Gene ID: C54_scaffold_3399_1148
Type: CAZyme
Location: 1660129 - 1662726 (+)

Gene ID: C54_scaffold_3399_1149
Type: TC
Location: 1663069 - 1666206 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
C54_scaffold_3399_1142	vegetarian > omnivore	1.64285	0.00141

Gene ID	Condition Pair	log2FC	FDR P-value
C54_scaffold_3399_1148	vegan > omnivore	1.22459	0.00290