Cluster: C54.bin_6_CGC78
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C54.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_862 | 1245637 | 1246791 | - | GT28 |
| TC | C54_scaffold_3399 | C54_scaffold_3399_863 | 1246803 | 1248080 | - | 2.A.103.1.3 |
| pfam | C54_scaffold_3399 | C54_scaffold_3399_864 | 1248113 | 1249447 | - | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | C54_scaffold_3399 | C54_scaffold_3399_865 | 1249573 | 1250841 | - | 9.B.146.1.6 |
Gene ID: C54_scaffold_3399_862
Type: CAZyme
Location: 1245637 - 1246791 (-)
Type: CAZyme
Location: 1245637 - 1246791 (-)
Gene ID: C54_scaffold_3399_863
Type: TC
Location: 1246803 - 1248080 (-)
Type: TC
Location: 1246803 - 1248080 (-)
Gene ID: C54_scaffold_3399_864
Type: pfam
Location: 1248113 - 1249447 (-)
Type: pfam
Location: 1248113 - 1249447 (-)
Gene ID: C54_scaffold_3399_865
Type: TC
Location: 1249573 - 1250841 (-)
Type: TC
Location: 1249573 - 1250841 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.