Cluster: C54.bin_6_CGC75
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: C54.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_759 | 1105745 | 1108831 | + | PL8_2 |
| sulfatase | C54_scaffold_3399 | C54_scaffold_3399_760 | 1108860 | 1110227 | + | S1_9 |
| pfam | C54_scaffold_3399 | C54_scaffold_3399_761 | 1110237 | 1111178 | - | Dus |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_762 | 1111404 | 1114304 | - | PL8_2 |
| TC | C54_scaffold_3399 | C54_scaffold_3399_763 | 1114435 | 1116015 | - | 8.A.46.1.3 |
| TC | C54_scaffold_3399 | C54_scaffold_3399_764 | 1116039 | 1119218 | - | 1.B.14.6.1 |
Gene ID: C54_scaffold_3399_759
Type: CAZyme
Location: 1105745 - 1108831 (+)
Type: CAZyme
Location: 1105745 - 1108831 (+)
Gene ID: C54_scaffold_3399_760
Type: sulfatase
Location: 1108860 - 1110227 (+)
Type: sulfatase
Location: 1108860 - 1110227 (+)
Gene ID: C54_scaffold_3399_761
Type: pfam
Location: 1110237 - 1111178 (-)
Type: pfam
Location: 1110237 - 1111178 (-)
Gene ID: C54_scaffold_3399_762
Type: CAZyme
Location: 1111404 - 1114304 (-)
Type: CAZyme
Location: 1111404 - 1114304 (-)
Gene ID: C54_scaffold_3399_763
Type: TC
Location: 1114435 - 1116015 (-)
Type: TC
Location: 1114435 - 1116015 (-)
Gene ID: C54_scaffold_3399_764
Type: TC
Location: 1116039 - 1119218 (-)
Type: TC
Location: 1116039 - 1119218 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C54_scaffold_3399_761 | vegan > omnivore | 1.36471 | 0.01049 |
| C54_scaffold_3399_761 | vegetarian > omnivore | 1.34000 | 0.00141 |
| C54_scaffold_3399_762 | vegetarian > omnivore | 1.17517 | 0.00141 |