Cluster: C54.bin_6_CGC74
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: C54.bin_6
- CGC Family ID: CGCFAM_05256
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_723 | 1050340 | 1051815 | + | GH30_3 |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_724 | 1051836 | 1053083 | + | GH5_46 |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_725 | 1053111 | 1055333 | + | GH3 |
| TC | C54_scaffold_3399 | C54_scaffold_3399_726 | 1055956 | 1056525 | + | 9.B.171.1.2 |
Gene ID: C54_scaffold_3399_723
Type: CAZyme
Location: 1050340 - 1051815 (+)
Type: CAZyme
Location: 1050340 - 1051815 (+)
Gene ID: C54_scaffold_3399_724
Type: CAZyme
Location: 1051836 - 1053083 (+)
Type: CAZyme
Location: 1051836 - 1053083 (+)
Gene ID: C54_scaffold_3399_725
Type: CAZyme
Location: 1053111 - 1055333 (+)
Type: CAZyme
Location: 1053111 - 1055333 (+)
Gene ID: C54_scaffold_3399_726
Type: TC
Location: 1055956 - 1056525 (+)
Type: TC
Location: 1055956 - 1056525 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C54_scaffold_3399_723 | vegan > omnivore | 1.62693 | 0.01049 |
| C54_scaffold_3399_723 | vegetarian > omnivore | 2.26525 | 0.00141 |
| C54_scaffold_3399_726 | vegetarian > omnivore | 1.01165 | 0.00141 |