Cluster: C54.bin_6_CGC73
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: C54.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C54_scaffold_3399 | C54_scaffold_3399_673 | 979474 | 982560 | + | 1.B.14.6.1 |
| pfam | C54_scaffold_3399 | C54_scaffold_3399_674 | 982576 | 984618 | + | SusD_RagB | SusD-like_3 |
| pfam | C54_scaffold_3399 | C54_scaffold_3399_675 | 984641 | 985639 | + | BT_3044-like_C | DUF4973 |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_676 | 985737 | 987683 | + | GH43_27 |
| TF | C54_scaffold_3399 | C54_scaffold_3399_677 | 987828 | 991862 | - | HTH_AraC |
| NULL(UNKNOWN) | C54_scaffold_3399 | C54_scaffold_3399_678 | 992074 | 992241 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_679 | 992259 | 993227 | + | GH43_18 |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_680 | 993257 | 994804 | + | CBM91 | GH43_10 |
| sulfatase | C54_scaffold_3399 | C54_scaffold_3399_681 | 994816 | 995946 | + | S1_22 |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_682 | 995978 | 996955 | + | GH43_31 |
Gene ID: C54_scaffold_3399_673
Type: TC
Location: 979474 - 982560 (+)
Type: TC
Location: 979474 - 982560 (+)
Gene ID: C54_scaffold_3399_674
Type: pfam
Location: 982576 - 984618 (+)
Type: pfam
Location: 982576 - 984618 (+)
Gene ID: C54_scaffold_3399_675
Type: pfam
Location: 984641 - 985639 (+)
Type: pfam
Location: 984641 - 985639 (+)
Gene ID: C54_scaffold_3399_676
Type: CAZyme
Location: 985737 - 987683 (+)
Type: CAZyme
Location: 985737 - 987683 (+)
Gene ID: C54_scaffold_3399_677
Type: TF
Location: 987828 - 991862 (-)
Type: TF
Location: 987828 - 991862 (-)
Gene ID: C54_scaffold_3399_678
Type:
Location: 992074 - 992241 (-)
Type:
Location: 992074 - 992241 (-)
Gene ID: C54_scaffold_3399_679
Type: CAZyme
Location: 992259 - 993227 (+)
Type: CAZyme
Location: 992259 - 993227 (+)
Gene ID: C54_scaffold_3399_680
Type: CAZyme
Location: 993257 - 994804 (+)
Type: CAZyme
Location: 993257 - 994804 (+)
Gene ID: C54_scaffold_3399_681
Type: sulfatase
Location: 994816 - 995946 (+)
Type: sulfatase
Location: 994816 - 995946 (+)
Gene ID: C54_scaffold_3399_682
Type: CAZyme
Location: 995978 - 996955 (+)
Type: CAZyme
Location: 995978 - 996955 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.