dbCAN HGM

Cluster: C54.bin_6_CGC71

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	C54_scaffold_3399	C54_scaffold_3399_587	838280	839848	-	GH30_4
TF	C54_scaffold_3399	C54_scaffold_3399_588	840039	844079	+	HTH_AraC
TC	C54_scaffold_3399	C54_scaffold_3399_589	844307	847552	+	1.B.14.6.1
pfam	C54_scaffold_3399	C54_scaffold_3399_590	847564	849405	+	SusD_RagB \| SusD-like_3
pfam	C54_scaffold_3399	C54_scaffold_3399_591	849421	850095	+	DUF3823 \| DUF3823_C
CAZyme	C54_scaffold_3399	C54_scaffold_3399_592	850206	852641	-	GH2
pfam	C54_scaffold_3399	C54_scaffold_3399_593	853093	853527	-	DUF6078
CAZyme	C54_scaffold_3399	C54_scaffold_3399_594	853681	855147	-	GH30_2

Gene ID: C54_scaffold_3399_587
Type: CAZyme
Location: 838280 - 839848 (-)

Gene ID: C54_scaffold_3399_588
Type: TF
Location: 840039 - 844079 (+)

Gene ID: C54_scaffold_3399_589
Type: TC
Location: 844307 - 847552 (+)

Gene ID: C54_scaffold_3399_590
Type: pfam
Location: 847564 - 849405 (+)

Gene ID: C54_scaffold_3399_591
Type: pfam
Location: 849421 - 850095 (+)

Gene ID: C54_scaffold_3399_592
Type: CAZyme
Location: 850206 - 852641 (-)

Gene ID: C54_scaffold_3399_593
Type: pfam
Location: 853093 - 853527 (-)

Gene ID: C54_scaffold_3399_594
Type: CAZyme
Location: 853681 - 855147 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
C54_scaffold_3399_594	vegan > omnivore	2.32371	0.01049
C54_scaffold_3399_594	vegetarian > omnivore	2.54978	0.00141