dbCAN HGM

Cluster: C54.bin_6_CGC70

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	C54_scaffold_3399	C54_scaffold_3399_540	781764	783194	+	2.A.1.7.1
pfam	C54_scaffold_3399	C54_scaffold_3399_541	783203	784858	+	FGGY_N \| FGGY_C
CAZyme	C54_scaffold_3399	C54_scaffold_3399_542	784870	786045	+	GH172
TC	C54_scaffold_3399	C54_scaffold_3399_543	786105	789077	+	1.B.14.6.1
pfam	C54_scaffold_3399	C54_scaffold_3399_544	789096	790670	+	SusD_RagB \| SusD-like_3
CAZyme	C54_scaffold_3399	C54_scaffold_3399_545	790736	792709	+	GH97
CAZyme	C54_scaffold_3399	C54_scaffold_3399_546	792716	794143	+	GH183

Gene ID: C54_scaffold_3399_540
Type: TC
Location: 781764 - 783194 (+)

Gene ID: C54_scaffold_3399_541
Type: pfam
Location: 783203 - 784858 (+)

Gene ID: C54_scaffold_3399_542
Type: CAZyme
Location: 784870 - 786045 (+)

Gene ID: C54_scaffold_3399_543
Type: TC
Location: 786105 - 789077 (+)

Gene ID: C54_scaffold_3399_544
Type: pfam
Location: 789096 - 790670 (+)

Gene ID: C54_scaffold_3399_545
Type: CAZyme
Location: 790736 - 792709 (+)

Gene ID: C54_scaffold_3399_546
Type: CAZyme
Location: 792716 - 794143 (+)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.