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Cluster: C54.bin_6_CGC69

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C54_scaffold_3399 C54_scaffold_3399_526 756071 756973 - 2.A.115.1.1
pfam C54_scaffold_3399 C54_scaffold_3399_527 757089 759926 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1_2
TC C54_scaffold_3399 C54_scaffold_3399_528 760558 761460 + 2.A.7.3.36
CAZyme C54_scaffold_3399 C54_scaffold_3399_529 761476 762984 - GH172
CAZyme C54_scaffold_3399 C54_scaffold_3399_530 763019 764173 - GH172
TC C54_scaffold_3399 C54_scaffold_3399_531 764245 765963 - 8.A.46.3.2
TC C54_scaffold_3399 C54_scaffold_3399_532 765976 769137 - 1.B.14.6.1
CAZyme C54_scaffold_3399 C54_scaffold_3399_533 769260 772325 - CBM38 | GH116
CAZyme C54_scaffold_3399 C54_scaffold_3399_534 772434 774989 - GH116
Gene ID: C54_scaffold_3399_526
Type: TC
Location: 756071 - 756973 (-)
Gene ID: C54_scaffold_3399_527
Type: pfam
Location: 757089 - 759926 (-)
Gene ID: C54_scaffold_3399_528
Type: TC
Location: 760558 - 761460 (+)
Gene ID: C54_scaffold_3399_529
Type: CAZyme
Location: 761476 - 762984 (-)
Gene ID: C54_scaffold_3399_530
Type: CAZyme
Location: 763019 - 764173 (-)
Gene ID: C54_scaffold_3399_531
Type: TC
Location: 764245 - 765963 (-)
Gene ID: C54_scaffold_3399_532
Type: TC
Location: 765976 - 769137 (-)
Gene ID: C54_scaffold_3399_533
Type: CAZyme
Location: 769260 - 772325 (-)
Gene ID: C54_scaffold_3399_534
Type: CAZyme
Location: 772434 - 774989 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C54_scaffold_3399_532 vegan > omnivore 2.77017 0.01049
C54_scaffold_3399_532 vegetarian > omnivore 1.05112 0.00141

🧭 Explore Read Mapping of CGC

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