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Cluster: C54.bin_6_CGC64

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C54_scaffold_3399 C54_scaffold_3399_320 465588 467231 + GH29
TC C54_scaffold_3399 C54_scaffold_3399_321 467351 468223 + 1.B.14.6.1
TC C54_scaffold_3399 C54_scaffold_3399_322 468362 470401 + 1.B.14.6.1
TC C54_scaffold_3399 C54_scaffold_3399_323 470426 472117 + 8.A.46.1.5
pfam C54_scaffold_3399 C54_scaffold_3399_324 472219 472602 + rhaM
CAZyme C54_scaffold_3399 C54_scaffold_3399_325 472676 474064 + GH43_34
CAZyme C54_scaffold_3399 C54_scaffold_3399_326 474077 474559 + GH43_10
TC C54_scaffold_3399 C54_scaffold_3399_327 474933 477761 + 1.B.14.12.2
Gene ID: C54_scaffold_3399_320
Type: CAZyme
Location: 465588 - 467231 (+)
Gene ID: C54_scaffold_3399_321
Type: TC
Location: 467351 - 468223 (+)
Gene ID: C54_scaffold_3399_322
Type: TC
Location: 468362 - 470401 (+)
Gene ID: C54_scaffold_3399_323
Type: TC
Location: 470426 - 472117 (+)
Gene ID: C54_scaffold_3399_324
Type: pfam
Location: 472219 - 472602 (+)
Gene ID: C54_scaffold_3399_325
Type: CAZyme
Location: 472676 - 474064 (+)
Gene ID: C54_scaffold_3399_326
Type: CAZyme
Location: 474077 - 474559 (+)
Gene ID: C54_scaffold_3399_327
Type: TC
Location: 474933 - 477761 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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