Cluster: C54.bin_6_CGC63
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 5
- Substrate:
- Genome ID: C54.bin_6
- CGC Family ID: CGCFAM_08006
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_310 | 450180 | 452516 | + | GH146 |
| TC | C54_scaffold_3399 | C54_scaffold_3399_311 | 452665 | 453924 | + | 2.A.1.7.2 |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_312 | 453961 | 455844 | + | GH146 |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_313 | 455857 | 458784 | + | GH115 |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_314 | 458793 | 461660 | + | GH2 | GH43_26 |
| CAZyme | C54_scaffold_3399 | C54_scaffold_3399_315 | 461693 | 463246 | + | CBM91 | GH43_10 |
Gene ID: C54_scaffold_3399_310
Type: CAZyme
Location: 450180 - 452516 (+)
Type: CAZyme
Location: 450180 - 452516 (+)
Gene ID: C54_scaffold_3399_311
Type: TC
Location: 452665 - 453924 (+)
Type: TC
Location: 452665 - 453924 (+)
Gene ID: C54_scaffold_3399_312
Type: CAZyme
Location: 453961 - 455844 (+)
Type: CAZyme
Location: 453961 - 455844 (+)
Gene ID: C54_scaffold_3399_313
Type: CAZyme
Location: 455857 - 458784 (+)
Type: CAZyme
Location: 455857 - 458784 (+)
Gene ID: C54_scaffold_3399_314
Type: CAZyme
Location: 458793 - 461660 (+)
Type: CAZyme
Location: 458793 - 461660 (+)
Gene ID: C54_scaffold_3399_315
Type: CAZyme
Location: 461693 - 463246 (+)
Type: CAZyme
Location: 461693 - 463246 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.