Cluster: C54.bin_6_CGC5
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: C54.bin_6
- CGC Family ID: CGCFAM_00548
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C54_contig_5485 | C54_contig_5485_82 | 130091 | 131347 | + | 2.A.66.2.10 |
| pfam | C54_contig_5485 | C54_contig_5485_83 | 131349 | 132311 | + | LicD |
| pfam | C54_contig_5485 | C54_contig_5485_84 | 132301 | 133272 | + | PS_pyruv_trans |
| CAZyme | C54_contig_5485 | C54_contig_5485_85 | 133238 | 134305 | + | GT2 |
| NULL(UNKNOWN) | C54_contig_5485 | C54_contig_5485_86 | 134312 | 135520 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C54_contig_5485 | C54_contig_5485_87 | 135528 | 136562 | + | GT4 |
| pfam | C54_contig_5485 | C54_contig_5485_88 | 136687 | 138003 | + | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | C54_contig_5485 | C54_contig_5485_89 | 138005 | 138760 | + | GT2 |
| pfam | C54_contig_5485 | C54_contig_5485_90 | 138843 | 140063 | + | Aminotran_1_2 | DegT_DnrJ_EryC1 |
| TC | C54_contig_5485 | C54_contig_5485_91 | 140063 | 140650 | + | 9.B.18.1.3 |
Gene ID: C54_contig_5485_82
Type: TC
Location: 130091 - 131347 (+)
Type: TC
Location: 130091 - 131347 (+)
Gene ID: C54_contig_5485_83
Type: pfam
Location: 131349 - 132311 (+)
Type: pfam
Location: 131349 - 132311 (+)
Gene ID: C54_contig_5485_84
Type: pfam
Location: 132301 - 133272 (+)
Type: pfam
Location: 132301 - 133272 (+)
Gene ID: C54_contig_5485_85
Type: CAZyme
Location: 133238 - 134305 (+)
Type: CAZyme
Location: 133238 - 134305 (+)
Gene ID: C54_contig_5485_86
Type:
Location: 134312 - 135520 (+)
Type:
Location: 134312 - 135520 (+)
Gene ID: C54_contig_5485_87
Type: CAZyme
Location: 135528 - 136562 (+)
Type: CAZyme
Location: 135528 - 136562 (+)
Gene ID: C54_contig_5485_88
Type: pfam
Location: 136687 - 138003 (+)
Type: pfam
Location: 136687 - 138003 (+)
Gene ID: C54_contig_5485_89
Type: CAZyme
Location: 138005 - 138760 (+)
Type: CAZyme
Location: 138005 - 138760 (+)
Gene ID: C54_contig_5485_90
Type: pfam
Location: 138843 - 140063 (+)
Type: pfam
Location: 138843 - 140063 (+)
Gene ID: C54_contig_5485_91
Type: TC
Location: 140063 - 140650 (+)
Type: TC
Location: 140063 - 140650 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.