Cluster: C54.bin_6_CGC49
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: C54.bin_6
- CGC Family ID: CGCFAM_00823
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C54_contig_3258 | C54_contig_3258_1489 | 1740312 | 1741865 | - | 2.A.47.4.5 |
| pfam | C54_contig_3258 | C54_contig_3258_1490 | 1741883 | 1742704 | - | Inositol_P |
| CAZyme | C54_contig_3258 | C54_contig_3258_1491 | 1743176 | 1746544 | - | GH2 |
| CAZyme | C54_contig_3258 | C54_contig_3258_1492 | 1746621 | 1747841 | - | GH88 |
| pfam | C54_contig_3258 | C54_contig_3258_1493 | 1747975 | 1749648 | - | SusD_RagB | SusD-like_3 |
| TC | C54_contig_3258 | C54_contig_3258_1494 | 1749662 | 1752439 | - | 1.B.14.6.1 |
| pfam | C54_contig_3258 | C54_contig_3258_1495 | 1752470 | 1754332 | - | SusD_RagB | SusD-like_3 |
| TC | C54_contig_3258 | C54_contig_3258_1496 | 1754345 | 1757494 | - | 1.B.14.6.1 |
| TF | C54_contig_3258 | C54_contig_3258_1497 | 1757706 | 1761809 | - | HTH_AraC |
| CAZyme | C54_contig_3258 | C54_contig_3258_1498 | 1761992 | 1764370 | + | GH95 |
| CAZyme | C54_contig_3258 | C54_contig_3258_1499 | 1764400 | 1765833 | + | GH29 |
| CAZyme | C54_contig_3258 | C54_contig_3258_1500 | 1765844 | 1766953 | + | GH105 |
| CAZyme | C54_contig_3258 | C54_contig_3258_1501 | 1767026 | 1769149 | + | PL8_3 |
Gene ID: C54_contig_3258_1489
Type: TC
Location: 1740312 - 1741865 (-)
Type: TC
Location: 1740312 - 1741865 (-)
Gene ID: C54_contig_3258_1490
Type: pfam
Location: 1741883 - 1742704 (-)
Type: pfam
Location: 1741883 - 1742704 (-)
Gene ID: C54_contig_3258_1491
Type: CAZyme
Location: 1743176 - 1746544 (-)
Type: CAZyme
Location: 1743176 - 1746544 (-)
Gene ID: C54_contig_3258_1492
Type: CAZyme
Location: 1746621 - 1747841 (-)
Type: CAZyme
Location: 1746621 - 1747841 (-)
Gene ID: C54_contig_3258_1493
Type: pfam
Location: 1747975 - 1749648 (-)
Type: pfam
Location: 1747975 - 1749648 (-)
Gene ID: C54_contig_3258_1494
Type: TC
Location: 1749662 - 1752439 (-)
Type: TC
Location: 1749662 - 1752439 (-)
Gene ID: C54_contig_3258_1495
Type: pfam
Location: 1752470 - 1754332 (-)
Type: pfam
Location: 1752470 - 1754332 (-)
Gene ID: C54_contig_3258_1496
Type: TC
Location: 1754345 - 1757494 (-)
Type: TC
Location: 1754345 - 1757494 (-)
Gene ID: C54_contig_3258_1497
Type: TF
Location: 1757706 - 1761809 (-)
Type: TF
Location: 1757706 - 1761809 (-)
Gene ID: C54_contig_3258_1498
Type: CAZyme
Location: 1761992 - 1764370 (+)
Type: CAZyme
Location: 1761992 - 1764370 (+)
Gene ID: C54_contig_3258_1499
Type: CAZyme
Location: 1764400 - 1765833 (+)
Type: CAZyme
Location: 1764400 - 1765833 (+)
Gene ID: C54_contig_3258_1500
Type: CAZyme
Location: 1765844 - 1766953 (+)
Type: CAZyme
Location: 1765844 - 1766953 (+)
Gene ID: C54_contig_3258_1501
Type: CAZyme
Location: 1767026 - 1769149 (+)
Type: CAZyme
Location: 1767026 - 1769149 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.