Cluster: C54.bin_6_CGC46
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: C54.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C54_contig_3258 | C54_contig_3258_1397 | 1626746 | 1629067 | - | 1.B.14.1.4 |
| NULL(UNKNOWN) | C54_contig_3258 | C54_contig_3258_1398 | 1629117 | 1629458 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| sulfatase | C54_contig_3258 | C54_contig_3258_1399 | 1629501 | 1631246 | - | S1_14 |
| TC | C54_contig_3258 | C54_contig_3258_1400 | 1631252 | 1633186 | - | 2.A.21.9.1 |
| pfam | C54_contig_3258 | C54_contig_3258_1401 | 1633437 | 1634387 | - | Glycos_transf_4 |
| pfam | C54_contig_3258 | C54_contig_3258_1402 | 1634425 | 1635402 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind |
| CAZyme | C54_contig_3258 | C54_contig_3258_1403 | 1635472 | 1636644 | - | GT4 |
| pfam | C54_contig_3258 | C54_contig_3258_1404 | 1636598 | 1637863 | - | UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| pfam | C54_contig_3258 | C54_contig_3258_1405 | 1637924 | 1638892 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | GDP_Man_Dehyd |
| CAZyme | C54_contig_3258 | C54_contig_3258_1406 | 1638915 | 1640018 | - | GT4 |
| pfam | C54_contig_3258 | C54_contig_3258_1407 | 1640059 | 1640796 | - | Polysacc_deac_1 | DUF2334 |
| pfam | C54_contig_3258 | C54_contig_3258_1408 | 1640797 | 1641891 | - | RimK | ATPgrasp_Ter |
| CAZyme | C54_contig_3258 | C54_contig_3258_1409 | 1642197 | 1643162 | - | GT100 |
| CAZyme | C54_contig_3258 | C54_contig_3258_1410 | 1643159 | 1644142 | - | GT2 |
Gene ID: C54_contig_3258_1397
Type: TC
Location: 1626746 - 1629067 (-)
Type: TC
Location: 1626746 - 1629067 (-)
Gene ID: C54_contig_3258_1398
Type:
Location: 1629117 - 1629458 (-)
Type:
Location: 1629117 - 1629458 (-)
Gene ID: C54_contig_3258_1399
Type: sulfatase
Location: 1629501 - 1631246 (-)
Type: sulfatase
Location: 1629501 - 1631246 (-)
Gene ID: C54_contig_3258_1400
Type: TC
Location: 1631252 - 1633186 (-)
Type: TC
Location: 1631252 - 1633186 (-)
Gene ID: C54_contig_3258_1401
Type: pfam
Location: 1633437 - 1634387 (-)
Type: pfam
Location: 1633437 - 1634387 (-)
Gene ID: C54_contig_3258_1402
Type: pfam
Location: 1634425 - 1635402 (-)
Type: pfam
Location: 1634425 - 1635402 (-)
Gene ID: C54_contig_3258_1403
Type: CAZyme
Location: 1635472 - 1636644 (-)
Type: CAZyme
Location: 1635472 - 1636644 (-)
Gene ID: C54_contig_3258_1404
Type: pfam
Location: 1636598 - 1637863 (-)
Type: pfam
Location: 1636598 - 1637863 (-)
Gene ID: C54_contig_3258_1405
Type: pfam
Location: 1637924 - 1638892 (-)
Type: pfam
Location: 1637924 - 1638892 (-)
Gene ID: C54_contig_3258_1406
Type: CAZyme
Location: 1638915 - 1640018 (-)
Type: CAZyme
Location: 1638915 - 1640018 (-)
Gene ID: C54_contig_3258_1407
Type: pfam
Location: 1640059 - 1640796 (-)
Type: pfam
Location: 1640059 - 1640796 (-)
Gene ID: C54_contig_3258_1408
Type: pfam
Location: 1640797 - 1641891 (-)
Type: pfam
Location: 1640797 - 1641891 (-)
Gene ID: C54_contig_3258_1409
Type: CAZyme
Location: 1642197 - 1643162 (-)
Type: CAZyme
Location: 1642197 - 1643162 (-)
Gene ID: C54_contig_3258_1410
Type: CAZyme
Location: 1643159 - 1644142 (-)
Type: CAZyme
Location: 1643159 - 1644142 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C54_contig_3258_1398 | vegan > omnivore | 1.89264 | 0.01049 |
| C54_contig_3258_1398 | vegetarian > omnivore | 2.46014 | 0.00141 |
| C54_contig_3258_1405 | vegan > omnivore | 2.06478 | 0.01049 |