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Cluster: C54.bin_6_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C54_contig_3258 C54_contig_3258_1095 1288998 1289315 - 2.A.78.1.1
TC C54_contig_3258 C54_contig_3258_1096 1289312 1290028 - 2.A.78.1.1
pfam C54_contig_3258 C54_contig_3258_1097 1291108 1291818 + TP_methylase
pfam C54_contig_3258 C54_contig_3258_1098 1291911 1292306 + DUF1573 | HYDIN_VesB_CFA65-like_Ig
TC C54_contig_3258 C54_contig_3258_1099 1292442 1294433 + 2.A.67.4.2
peptidase C54_contig_3258 C54_contig_3258_1100 1294444 1295316 + S09.UPW
CAZyme C54_contig_3258 C54_contig_3258_1101 1295328 1298543 + GH2
Gene ID: C54_contig_3258_1095
Type: TC
Location: 1288998 - 1289315 (-)
Gene ID: C54_contig_3258_1096
Type: TC
Location: 1289312 - 1290028 (-)
Gene ID: C54_contig_3258_1097
Type: pfam
Location: 1291108 - 1291818 (+)
Gene ID: C54_contig_3258_1098
Type: pfam
Location: 1291911 - 1292306 (+)
Gene ID: C54_contig_3258_1099
Type: TC
Location: 1292442 - 1294433 (+)
Gene ID: C54_contig_3258_1100
Type: peptidase
Location: 1294444 - 1295316 (+)
Gene ID: C54_contig_3258_1101
Type: CAZyme
Location: 1295328 - 1298543 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C54_contig_3258_1095 vegan > omnivore 3.25873 0.01049
C54_contig_3258_1095 vegetarian > omnivore 3.75444 0.00141
C54_contig_3258_1096 vegan > omnivore 3.63351 0.01049
C54_contig_3258_1096 vegetarian > omnivore 3.65437 0.00141

🧭 Explore Read Mapping of CGC

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