Cluster: C54.bin_6_CGC40
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C54.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_contig_3258 | C54_contig_3258_1069 | 1255401 | 1257806 | - | GH18 |
| pfam | C54_contig_3258 | C54_contig_3258_1070 | 1257824 | 1258759 | - | DUF6562 |
| pfam | C54_contig_3258 | C54_contig_3258_1071 | 1258985 | 1259563 | + | DUF4251 |
| TC | C54_contig_3258 | C54_contig_3258_1072 | 1260131 | 1262143 | + | 1.B.14.10.1 |
Gene ID: C54_contig_3258_1069
Type: CAZyme
Location: 1255401 - 1257806 (-)
Type: CAZyme
Location: 1255401 - 1257806 (-)
Gene ID: C54_contig_3258_1070
Type: pfam
Location: 1257824 - 1258759 (-)
Type: pfam
Location: 1257824 - 1258759 (-)
Gene ID: C54_contig_3258_1071
Type: pfam
Location: 1258985 - 1259563 (+)
Type: pfam
Location: 1258985 - 1259563 (+)
Gene ID: C54_contig_3258_1072
Type: TC
Location: 1260131 - 1262143 (+)
Type: TC
Location: 1260131 - 1262143 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C54_contig_3258_1071 | vegan > omnivore | 3.07384 | 0.01049 |
| C54_contig_3258_1071 | vegetarian > omnivore | 3.37009 | 0.00141 |