dbCAN HGM

Cluster: C54.bin_6_CGC4

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	C54_contig_5485	C54_contig_5485_68	111140	114295	+	1.B.14.6.1
pfam	C54_contig_5485	C54_contig_5485_69	114323	115873	+	SusD_RagB \| SusD-like_3
NULL(UNKNOWN)	C54_contig_5485	C54_contig_5485_70	115894	117297	+	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	C54_contig_5485	C54_contig_5485_71	117299	118414	+	GH16_3
CAZyme	C54_contig_5485	C54_contig_5485_72	118425	120677	+	GH3
pfam	C54_contig_5485	C54_contig_5485_73	120740	122020	-	Enolase_C \| Enolase_N \| MR_MLE_C
TC	C54_contig_5485	C54_contig_5485_74	122125	122499	-	1.A.43.1.1
CAZyme	C54_contig_5485	C54_contig_5485_75	122727	124883	+	GH97

Gene ID: C54_contig_5485_68
Type: TC
Location: 111140 - 114295 (+)

Gene ID: C54_contig_5485_69
Type: pfam
Location: 114323 - 115873 (+)

Gene ID: C54_contig_5485_70
Type:
Location: 115894 - 117297 (+)

Gene ID: C54_contig_5485_71
Type: CAZyme
Location: 117299 - 118414 (+)

Gene ID: C54_contig_5485_72
Type: CAZyme
Location: 118425 - 120677 (+)

Gene ID: C54_contig_5485_73
Type: pfam
Location: 120740 - 122020 (-)

Gene ID: C54_contig_5485_74
Type: TC
Location: 122125 - 122499 (-)

Gene ID: C54_contig_5485_75
Type: CAZyme
Location: 122727 - 124883 (+)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
C54_contig_5485_75	vegetarian > vegan	1.04809	0.00827