Cluster: C54.bin_6_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C54.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_contig_3258 | C54_contig_3258_703 | 832512 | 833507 | + | CE1 |
| pfam | C54_contig_3258 | C54_contig_3258_704 | 833693 | 833926 | + | tRNA_edit |
| NULL(UNKNOWN) | C54_contig_3258 | C54_contig_3258_705 | 834098 | 834613 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C54_contig_3258 | C54_contig_3258_706 | 834633 | 835673 | - | 2.A.59.1.5 |
| TC | C54_contig_3258 | C54_contig_3258_707 | 835673 | 837385 | - | 3.A.4.1.1 |
Gene ID: C54_contig_3258_703
Type: CAZyme
Location: 832512 - 833507 (+)
Type: CAZyme
Location: 832512 - 833507 (+)
Gene ID: C54_contig_3258_704
Type: pfam
Location: 833693 - 833926 (+)
Type: pfam
Location: 833693 - 833926 (+)
Gene ID: C54_contig_3258_705
Type:
Location: 834098 - 834613 (+)
Type:
Location: 834098 - 834613 (+)
Gene ID: C54_contig_3258_706
Type: TC
Location: 834633 - 835673 (-)
Type: TC
Location: 834633 - 835673 (-)
Gene ID: C54_contig_3258_707
Type: TC
Location: 835673 - 837385 (-)
Type: TC
Location: 835673 - 837385 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C54_contig_3258_706 | vegan > omnivore | 1.20914 | 0.01049 |
| C54_contig_3258_706 | vegetarian > omnivore | 2.34354 | 0.00141 |
| C54_contig_3258_706 | vegetarian > vegan | 1.13439 | 0.00827 |
| C54_contig_3258_707 | vegetarian > omnivore | 1.21547 | 0.00141 |