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Cluster: C54.bin_6_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C54_contig_3258 C54_contig_3258_588 693394 695148 + 3.A.2.3.3
TC C54_contig_3258 C54_contig_3258_589 695268 696605 + 3.A.2.3.3
pfam C54_contig_3258 C54_contig_3258_590 696626 696979 + 23S_rRNA_IVP
pfam C54_contig_3258 C54_contig_3258_591 697008 697610 + ATP-synt_D
TC C54_contig_3258 C54_contig_3258_592 697607 699412 + 3.A.2.2.2
TC C54_contig_3258 C54_contig_3258_593 699455 699919 + 3.A.2.2.2
CAZyme C54_contig_3258 C54_contig_3258_594 700236 701897 + GT3
CAZyme C54_contig_3258 C54_contig_3258_595 701935 704499 + GT35
Gene ID: C54_contig_3258_588
Type: TC
Location: 693394 - 695148 (+)
Gene ID: C54_contig_3258_589
Type: TC
Location: 695268 - 696605 (+)
Gene ID: C54_contig_3258_590
Type: pfam
Location: 696626 - 696979 (+)
Gene ID: C54_contig_3258_591
Type: pfam
Location: 697008 - 697610 (+)
Gene ID: C54_contig_3258_592
Type: TC
Location: 697607 - 699412 (+)
Gene ID: C54_contig_3258_593
Type: TC
Location: 699455 - 699919 (+)
Gene ID: C54_contig_3258_594
Type: CAZyme
Location: 700236 - 701897 (+)
Gene ID: C54_contig_3258_595
Type: CAZyme
Location: 701935 - 704499 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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