Cluster: C54.bin_6_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C54.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_contig_3258 | C54_contig_3258_239 | 270106 | 271977 | - | GH18 |
| NULL(UNKNOWN) | C54_contig_3258 | C54_contig_3258_240 | 271984 | 272889 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C54_contig_3258 | C54_contig_3258_241 | 272912 | 274717 | - | SusD_RagB | SusD-like_3 |
| TC | C54_contig_3258 | C54_contig_3258_242 | 274730 | 277948 | - | 1.B.14.6.1 |
Gene ID: C54_contig_3258_239
Type: CAZyme
Location: 270106 - 271977 (-)
Type: CAZyme
Location: 270106 - 271977 (-)
Gene ID: C54_contig_3258_240
Type:
Location: 271984 - 272889 (-)
Type:
Location: 271984 - 272889 (-)
Gene ID: C54_contig_3258_241
Type: pfam
Location: 272912 - 274717 (-)
Type: pfam
Location: 272912 - 274717 (-)
Gene ID: C54_contig_3258_242
Type: TC
Location: 274730 - 277948 (-)
Type: TC
Location: 274730 - 277948 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.