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Cluster: C54.bin_6_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C54_contig_3258 C54_contig_3258_65 68891 69259 + 2.A.7.34.3
pfam C54_contig_3258 C54_contig_3258_66 69362 70384 - ApbE
TC C54_contig_3258 C54_contig_3258_67 70394 70975 - 2.A.107.1.2
pfam C54_contig_3258 C54_contig_3258_68 70980 71744 - DUF6048
pfam C54_contig_3258 C54_contig_3258_69 71707 72207 - DUF6452
CAZyme C54_contig_3258 C54_contig_3258_70 72212 73165 - GT2
Gene ID: C54_contig_3258_65
Type: TC
Location: 68891 - 69259 (+)
Gene ID: C54_contig_3258_66
Type: pfam
Location: 69362 - 70384 (-)
Gene ID: C54_contig_3258_67
Type: TC
Location: 70394 - 70975 (-)
Gene ID: C54_contig_3258_68
Type: pfam
Location: 70980 - 71744 (-)
Gene ID: C54_contig_3258_69
Type: pfam
Location: 71707 - 72207 (-)
Gene ID: C54_contig_3258_70
Type: CAZyme
Location: 72212 - 73165 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C54_contig_3258_65 vegan > omnivore 1.00751 0.01049
C54_contig_3258_66 vegetarian > omnivore 1.01263 0.00141
C54_contig_3258_67 vegan > omnivore 1.51045 0.01049
C54_contig_3258_67 vegetarian > omnivore 1.64746 0.00141
C54_contig_3258_68 vegan > omnivore 1.67482 0.01049
C54_contig_3258_68 vegetarian > omnivore 1.56262 0.00141
C54_contig_3258_69 vegan > omnivore 1.34075 0.01049
C54_contig_3258_69 vegetarian > omnivore 1.62792 0.00141

🧭 Explore Read Mapping of CGC

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