Cluster: C54.bin_6_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: C54.bin_6
- CGC Family ID: CGCFAM_07157
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_contig_1855 | C54_contig_1855_545 | 682773 | 684377 | - | GH20 |
| CAZyme | C54_contig_1855 | C54_contig_1855_546 | 684467 | 687271 | - | GH105 |
| TC | C54_contig_1855 | C54_contig_1855_547 | 687413 | 689395 | - | 8.A.46.1.5 |
| TC | C54_contig_1855 | C54_contig_1855_548 | 689409 | 692714 | - | 1.B.14.6.1 |
| TF | C54_contig_1855 | C54_contig_1855_549 | 692949 | 693467 | + | HTH_AraC |
| CAZyme | C54_contig_1855 | C54_contig_1855_550 | 693528 | 695054 | - | GH136 |
Gene ID: C54_contig_1855_545
Type: CAZyme
Location: 682773 - 684377 (-)
Type: CAZyme
Location: 682773 - 684377 (-)
Gene ID: C54_contig_1855_546
Type: CAZyme
Location: 684467 - 687271 (-)
Type: CAZyme
Location: 684467 - 687271 (-)
Gene ID: C54_contig_1855_547
Type: TC
Location: 687413 - 689395 (-)
Type: TC
Location: 687413 - 689395 (-)
Gene ID: C54_contig_1855_548
Type: TC
Location: 689409 - 692714 (-)
Type: TC
Location: 689409 - 692714 (-)
Gene ID: C54_contig_1855_549
Type: TF
Location: 692949 - 693467 (+)
Type: TF
Location: 692949 - 693467 (+)
Gene ID: C54_contig_1855_550
Type: CAZyme
Location: 693528 - 695054 (-)
Type: CAZyme
Location: 693528 - 695054 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.