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Cluster: C50.bin_3_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C50_contig_484 C50_contig_484_50 43681 45435 + 3.A.2.3.3
TC C50_contig_484 C50_contig_484_51 45444 46772 + 3.A.2.3.3
pfam C50_contig_484 C50_contig_484_52 46805 47410 + ATP-synt_D
TC C50_contig_484 C50_contig_484_53 47407 49221 + 3.A.2.2.2
TC C50_contig_484 C50_contig_484_54 49405 49869 + 3.A.2.2.2
CAZyme C50_contig_484 C50_contig_484_55 50290 51954 + GT3
CAZyme C50_contig_484 C50_contig_484_56 51992 54556 + GT35
Gene ID: C50_contig_484_50
Type: TC
Location: 43681 - 45435 (+)
Gene ID: C50_contig_484_51
Type: TC
Location: 45444 - 46772 (+)
Gene ID: C50_contig_484_52
Type: pfam
Location: 46805 - 47410 (+)
Gene ID: C50_contig_484_53
Type: TC
Location: 47407 - 49221 (+)
Gene ID: C50_contig_484_54
Type: TC
Location: 49405 - 49869 (+)
Gene ID: C50_contig_484_55
Type: CAZyme
Location: 50290 - 51954 (+)
Gene ID: C50_contig_484_56
Type: CAZyme
Location: 51992 - 54556 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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