Cluster: C46.CMAG_3_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: C46.CMAG_3
- CGC Family ID: CGCFAM_03454
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C46_contig_365 | C46_contig_365_618 | 676004 | 676867 | - | CE4 |
| TC | C46_contig_365 | C46_contig_365_619 | 677047 | 679152 | + | 1.B.52.2.1 |
| pfam | C46_contig_365 | C46_contig_365_620 | 679196 | 680269 | + | PFK |
| CAZyme | C46_contig_365 | C46_contig_365_621 | 680419 | 681861 | - | GT5 |
| TC | C46_contig_365 | C46_contig_365_622 | 682094 | 683710 | + | 3.A.1.121.4 |
| pfam | C46_contig_365 | C46_contig_365_623 | 683735 | 684232 | + | Acetyltransf_1 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10 |
| CAZyme | C46_contig_365 | C46_contig_365_624 | 684330 | 685829 | + | CE20 |
Gene ID: C46_contig_365_618
Type: CAZyme
Location: 676004 - 676867 (-)
Type: CAZyme
Location: 676004 - 676867 (-)
Gene ID: C46_contig_365_619
Type: TC
Location: 677047 - 679152 (+)
Type: TC
Location: 677047 - 679152 (+)
Gene ID: C46_contig_365_620
Type: pfam
Location: 679196 - 680269 (+)
Type: pfam
Location: 679196 - 680269 (+)
Gene ID: C46_contig_365_621
Type: CAZyme
Location: 680419 - 681861 (-)
Type: CAZyme
Location: 680419 - 681861 (-)
Gene ID: C46_contig_365_622
Type: TC
Location: 682094 - 683710 (+)
Type: TC
Location: 682094 - 683710 (+)
Gene ID: C46_contig_365_623
Type: pfam
Location: 683735 - 684232 (+)
Type: pfam
Location: 683735 - 684232 (+)
Gene ID: C46_contig_365_624
Type: CAZyme
Location: 684330 - 685829 (+)
Type: CAZyme
Location: 684330 - 685829 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.