Cluster: C46.CMAG_3_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: C46.CMAG_3
- CGC Family ID: CGCFAM_05250
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C46_contig_365 | C46_contig_365_567 | 613730 | 614929 | - | 2.A.36.2.1 |
| TC | C46_contig_365 | C46_contig_365_568 | 615090 | 617270 | - | 3.A.1.106.2 |
| pfam | C46_contig_365 | C46_contig_365_569 | 617306 | 617848 | - | DUF1854 |
| TC | C46_contig_365 | C46_contig_365_570 | 617865 | 620135 | - | 3.A.1.135.5 |
| NULL(UNKNOWN) | C46_contig_365 | C46_contig_365_571 | 620300 | 620416 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C46_contig_365 | C46_contig_365_572 | 620511 | 622007 | - | 2.A.22.5.3 |
| STP | C46_contig_365 | C46_contig_365_573 | 622276 | 623229 | - | PfkB |
| CAZyme | C46_contig_365 | C46_contig_365_574 | 623244 | 624614 | - | GH32 |
| TC | C46_contig_365 | C46_contig_365_575 | 624670 | 626607 | - | 4.A.1.2.12 |
| TF | C46_contig_365 | C46_contig_365_576 | 626772 | 627773 | - | LacI |
| TC | C46_contig_365 | C46_contig_365_577 | 627914 | 629266 | - | 2.A.66.1.33 |
| CAZyme | C46_contig_365 | C46_contig_365_578 | 629259 | 631943 | - | GH59 |
Gene ID: C46_contig_365_567
Type: TC
Location: 613730 - 614929 (-)
Type: TC
Location: 613730 - 614929 (-)
Gene ID: C46_contig_365_568
Type: TC
Location: 615090 - 617270 (-)
Type: TC
Location: 615090 - 617270 (-)
Gene ID: C46_contig_365_569
Type: pfam
Location: 617306 - 617848 (-)
Type: pfam
Location: 617306 - 617848 (-)
Gene ID: C46_contig_365_570
Type: TC
Location: 617865 - 620135 (-)
Type: TC
Location: 617865 - 620135 (-)
Gene ID: C46_contig_365_571
Type:
Location: 620300 - 620416 (-)
Type:
Location: 620300 - 620416 (-)
Gene ID: C46_contig_365_572
Type: TC
Location: 620511 - 622007 (-)
Type: TC
Location: 620511 - 622007 (-)
Gene ID: C46_contig_365_573
Type: STP
Location: 622276 - 623229 (-)
Type: STP
Location: 622276 - 623229 (-)
Gene ID: C46_contig_365_574
Type: CAZyme
Location: 623244 - 624614 (-)
Type: CAZyme
Location: 623244 - 624614 (-)
Gene ID: C46_contig_365_575
Type: TC
Location: 624670 - 626607 (-)
Type: TC
Location: 624670 - 626607 (-)
Gene ID: C46_contig_365_576
Type: TF
Location: 626772 - 627773 (-)
Type: TF
Location: 626772 - 627773 (-)
Gene ID: C46_contig_365_577
Type: TC
Location: 627914 - 629266 (-)
Type: TC
Location: 627914 - 629266 (-)
Gene ID: C46_contig_365_578
Type: CAZyme
Location: 629259 - 631943 (-)
Type: CAZyme
Location: 629259 - 631943 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.