Cluster: C46.CMAG_3_CGC3
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 2
- Substrate:
- Genome ID: C46.CMAG_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C46_contig_365 | C46_contig_365_379 | 394857 | 395801 | + | 3.A.1.5.20 |
| TC | C46_contig_365 | C46_contig_365_380 | 395815 | 396717 | + | 3.A.1.5.38 |
| TC | C46_contig_365 | C46_contig_365_381 | 396737 | 397738 | + | 3.A.1.5.22 |
| TC | C46_contig_365 | C46_contig_365_382 | 397731 | 398726 | + | 3.A.1.5.20 |
| TC | C46_contig_365 | C46_contig_365_383 | 398759 | 400381 | + | 3.A.1.5.11 |
| TC | C46_contig_365 | C46_contig_365_384 | 400460 | 402121 | + | 1.A.11.2.7 |
| TF | C46_contig_365 | C46_contig_365_385 | 402152 | 402988 | + | MerR |
| NULL(UNKNOWN) | C46_contig_365 | C46_contig_365_386 | 403073 | 403237 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C46_contig_365 | C46_contig_365_387 | 403342 | 406071 | - | CBM35 | GH26 |
| NULL(UNKNOWN) | C46_contig_365 | C46_contig_365_388 | 406211 | 406555 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | C46_contig_365 | C46_contig_365_389 | 406811 | 413218 | + | S08.UPA |
| TC | C46_contig_365 | C46_contig_365_390 | 413868 | 416030 | + | 9.B.34.1.3 |
| CAZyme | C46_contig_365 | C46_contig_365_391 | 416118 | 418079 | + | CBM2 | GH5_1 |
| pfam | C46_contig_365 | C46_contig_365_392 | 418140 | 419009 | - | DegV |
| TC | C46_contig_365 | C46_contig_365_393 | 419108 | 421462 | - | 3.A.9.1.2 |
Gene ID: C46_contig_365_379
Type: TC
Location: 394857 - 395801 (+)
Type: TC
Location: 394857 - 395801 (+)
Gene ID: C46_contig_365_380
Type: TC
Location: 395815 - 396717 (+)
Type: TC
Location: 395815 - 396717 (+)
Gene ID: C46_contig_365_381
Type: TC
Location: 396737 - 397738 (+)
Type: TC
Location: 396737 - 397738 (+)
Gene ID: C46_contig_365_382
Type: TC
Location: 397731 - 398726 (+)
Type: TC
Location: 397731 - 398726 (+)
Gene ID: C46_contig_365_383
Type: TC
Location: 398759 - 400381 (+)
Type: TC
Location: 398759 - 400381 (+)
Gene ID: C46_contig_365_384
Type: TC
Location: 400460 - 402121 (+)
Type: TC
Location: 400460 - 402121 (+)
Gene ID: C46_contig_365_385
Type: TF
Location: 402152 - 402988 (+)
Type: TF
Location: 402152 - 402988 (+)
Gene ID: C46_contig_365_386
Type:
Location: 403073 - 403237 (-)
Type:
Location: 403073 - 403237 (-)
Gene ID: C46_contig_365_387
Type: CAZyme
Location: 403342 - 406071 (-)
Type: CAZyme
Location: 403342 - 406071 (-)
Gene ID: C46_contig_365_388
Type:
Location: 406211 - 406555 (-)
Type:
Location: 406211 - 406555 (-)
Gene ID: C46_contig_365_389
Type: peptidase
Location: 406811 - 413218 (+)
Type: peptidase
Location: 406811 - 413218 (+)
Gene ID: C46_contig_365_390
Type: TC
Location: 413868 - 416030 (+)
Type: TC
Location: 413868 - 416030 (+)
Gene ID: C46_contig_365_391
Type: CAZyme
Location: 416118 - 418079 (+)
Type: CAZyme
Location: 416118 - 418079 (+)
Gene ID: C46_contig_365_392
Type: pfam
Location: 418140 - 419009 (-)
Type: pfam
Location: 418140 - 419009 (-)
Gene ID: C46_contig_365_393
Type: TC
Location: 419108 - 421462 (-)
Type: TC
Location: 419108 - 421462 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.