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Cluster: C46.CMAG_3_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C46_contig_365 C46_contig_365_2437 2638426 2641176 - GH3
pfam C46_contig_365 C46_contig_365_2438 2641346 2647180 + DUF3320 | AAA_11 | AAA_11 | AAA_12 | DUF4011 | MTES_1575
TC C46_contig_365 C46_contig_365_2439 2647242 2648978 - 3.A.1.21.1
TC C46_contig_365 C46_contig_365_2440 2648981 2650771 - 3.A.1.21.1
STP C46_contig_365 C46_contig_365_2441 2650985 2651605 - TetR_N
TC C46_contig_365 C46_contig_365_2442 2651767 2652915 + 2.A.45.2.6
pfam C46_contig_365 C46_contig_365_2443 2652996 2653100 + DUF3789
TC C46_contig_365 C46_contig_365_2444 2653299 2654834 + 2.A.21.2.2
STP C46_contig_365 C46_contig_365_2445 2655341 2655745 - NUDIX
TC C46_contig_365 C46_contig_365_2446 2655920 2656153 - 3.D.1.6.4
pfam C46_contig_365 C46_contig_365_2447 2656265 2657080 - Carboxyl_trans | ACCA
TC C46_contig_365 C46_contig_365_2448 2657073 2657951 - 3.B.1.1.5
Gene ID: C46_contig_365_2437
Type: CAZyme
Location: 2638426 - 2641176 (-)
Gene ID: C46_contig_365_2438
Type: pfam
Location: 2641346 - 2647180 (+)
Gene ID: C46_contig_365_2439
Type: TC
Location: 2647242 - 2648978 (-)
Gene ID: C46_contig_365_2440
Type: TC
Location: 2648981 - 2650771 (-)
Gene ID: C46_contig_365_2441
Type: STP
Location: 2650985 - 2651605 (-)
Gene ID: C46_contig_365_2442
Type: TC
Location: 2651767 - 2652915 (+)
Gene ID: C46_contig_365_2443
Type: pfam
Location: 2652996 - 2653100 (+)
Gene ID: C46_contig_365_2444
Type: TC
Location: 2653299 - 2654834 (+)
Gene ID: C46_contig_365_2445
Type: STP
Location: 2655341 - 2655745 (-)
Gene ID: C46_contig_365_2446
Type: TC
Location: 2655920 - 2656153 (-)
Gene ID: C46_contig_365_2447
Type: pfam
Location: 2656265 - 2657080 (-)
Gene ID: C46_contig_365_2448
Type: TC
Location: 2657073 - 2657951 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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