Cluster: C46.CMAG_3_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: C46.CMAG_3
- CGC Family ID: CGCFAM_05249
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C46_contig_365 | C46_contig_365_2327 | 2526752 | 2527477 | - | 3.A.1.3.25 |
| TC | C46_contig_365 | C46_contig_365_2328 | 2527464 | 2528156 | - | 3.A.1.3.12 |
| TC | C46_contig_365 | C46_contig_365_2329 | 2528225 | 2529004 | - | 3.A.1.3.27 |
| pfam | C46_contig_365 | C46_contig_365_2330 | 2529218 | 2529853 | - | Pro_isomerase |
| pfam | C46_contig_365 | C46_contig_365_2331 | 2530030 | 2532759 | + | YfhO |
| CAZyme | C46_contig_365 | C46_contig_365_2332 | 2533022 | 2534674 | - | CBM35 | GH26 |
| CAZyme | C46_contig_365 | C46_contig_365_2333 | 2534914 | 2535759 | - | GT2 |
Gene ID: C46_contig_365_2327
Type: TC
Location: 2526752 - 2527477 (-)
Type: TC
Location: 2526752 - 2527477 (-)
Gene ID: C46_contig_365_2328
Type: TC
Location: 2527464 - 2528156 (-)
Type: TC
Location: 2527464 - 2528156 (-)
Gene ID: C46_contig_365_2329
Type: TC
Location: 2528225 - 2529004 (-)
Type: TC
Location: 2528225 - 2529004 (-)
Gene ID: C46_contig_365_2330
Type: pfam
Location: 2529218 - 2529853 (-)
Type: pfam
Location: 2529218 - 2529853 (-)
Gene ID: C46_contig_365_2331
Type: pfam
Location: 2530030 - 2532759 (+)
Type: pfam
Location: 2530030 - 2532759 (+)
Gene ID: C46_contig_365_2332
Type: CAZyme
Location: 2533022 - 2534674 (-)
Type: CAZyme
Location: 2533022 - 2534674 (-)
Gene ID: C46_contig_365_2333
Type: CAZyme
Location: 2534914 - 2535759 (-)
Type: CAZyme
Location: 2534914 - 2535759 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.