Cluster: C46.CMAG_3_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: C46.CMAG_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C46_contig_365 | C46_contig_365_2313 | 2508755 | 2511088 | - | 3.A.3.6.10 |
| TF | C46_contig_365 | C46_contig_365_2314 | 2511128 | 2511493 | - | HTH_5 |
| TC | C46_contig_365 | C46_contig_365_2315 | 2512202 | 2512873 | + | 1.C.113.1.1 |
| CAZyme | C46_contig_365 | C46_contig_365_2316 | 2513059 | 2514537 | + | GH77 |
| CAZyme | C46_contig_365 | C46_contig_365_2317 | 2515061 | 2517442 | + | GT35 |
| pfam | C46_contig_365 | C46_contig_365_2318 | 2517659 | 2518213 | + | PAP2 | PAP2_3 |
| CAZyme | C46_contig_365 | C46_contig_365_2319 | 2518334 | 2519134 | + | CE4 |
Gene ID: C46_contig_365_2313
Type: TC
Location: 2508755 - 2511088 (-)
Type: TC
Location: 2508755 - 2511088 (-)
Gene ID: C46_contig_365_2314
Type: TF
Location: 2511128 - 2511493 (-)
Type: TF
Location: 2511128 - 2511493 (-)
Gene ID: C46_contig_365_2315
Type: TC
Location: 2512202 - 2512873 (+)
Type: TC
Location: 2512202 - 2512873 (+)
Gene ID: C46_contig_365_2316
Type: CAZyme
Location: 2513059 - 2514537 (+)
Type: CAZyme
Location: 2513059 - 2514537 (+)
Gene ID: C46_contig_365_2317
Type: CAZyme
Location: 2515061 - 2517442 (+)
Type: CAZyme
Location: 2515061 - 2517442 (+)
Gene ID: C46_contig_365_2318
Type: pfam
Location: 2517659 - 2518213 (+)
Type: pfam
Location: 2517659 - 2518213 (+)
Gene ID: C46_contig_365_2319
Type: CAZyme
Location: 2518334 - 2519134 (+)
Type: CAZyme
Location: 2518334 - 2519134 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.