Cluster: C46.CMAG_1_CGC40
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: C46.CMAG_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C46_contig_1457 | C46_contig_1457_2027 | 2381141 | 2382193 | - | 2.A.20.1.7 |
| pfam | C46_contig_1457 | C46_contig_1457_2028 | 2382313 | 2382510 | - | Sel_put |
| TC | C46_contig_1457 | C46_contig_1457_2029 | 2382568 | 2385018 | - | 2.A.114.1.7 |
| CAZyme | C46_contig_1457 | C46_contig_1457_2030 | 2385212 | 2386507 | + | GH13_20 |
| STP | C46_contig_1457 | C46_contig_1457_2031 | 2386536 | 2387039 | - | TetR_N |
| TC | C46_contig_1457 | C46_contig_1457_2032 | 2387319 | 2389505 | - | 1.I.1.1.3 |
| TC | C46_contig_1457 | C46_contig_1457_2033 | 2389885 | 2391174 | - | 2.A.40.1.3 |
Gene ID: C46_contig_1457_2027
Type: TC
Location: 2381141 - 2382193 (-)
Type: TC
Location: 2381141 - 2382193 (-)
Gene ID: C46_contig_1457_2028
Type: pfam
Location: 2382313 - 2382510 (-)
Type: pfam
Location: 2382313 - 2382510 (-)
Gene ID: C46_contig_1457_2029
Type: TC
Location: 2382568 - 2385018 (-)
Type: TC
Location: 2382568 - 2385018 (-)
Gene ID: C46_contig_1457_2030
Type: CAZyme
Location: 2385212 - 2386507 (+)
Type: CAZyme
Location: 2385212 - 2386507 (+)
Gene ID: C46_contig_1457_2031
Type: STP
Location: 2386536 - 2387039 (-)
Type: STP
Location: 2386536 - 2387039 (-)
Gene ID: C46_contig_1457_2032
Type: TC
Location: 2387319 - 2389505 (-)
Type: TC
Location: 2387319 - 2389505 (-)
Gene ID: C46_contig_1457_2033
Type: TC
Location: 2389885 - 2391174 (-)
Type: TC
Location: 2389885 - 2391174 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium longum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.