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Cluster: C46.CMAG_1_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C46_contig_1457 C46_contig_1457_1192 1454552 1455865 + 3.A.1.1.21
TC C46_contig_1457 C46_contig_1457_1193 1455959 1457011 + 3.A.1.1.25
TC C46_contig_1457 C46_contig_1457_1194 1457008 1457904 + 3.A.1.1.25
CAZyme C46_contig_1457 C46_contig_1457_1195 1458019 1459638 + CBM91 | GH43_11
CAZyme C46_contig_1457 C46_contig_1457_1196 1459715 1461487 + GH43_12
pfam C46_contig_1457 C46_contig_1457_1197 1461560 1462192 + Hexapep | Hexapep_2 | Hexapep_2
CAZyme C46_contig_1457 C46_contig_1457_1198 1462256 1464235 + GH120
Gene ID: C46_contig_1457_1192
Type: TC
Location: 1454552 - 1455865 (+)
Gene ID: C46_contig_1457_1193
Type: TC
Location: 1455959 - 1457011 (+)
Gene ID: C46_contig_1457_1194
Type: TC
Location: 1457008 - 1457904 (+)
Gene ID: C46_contig_1457_1195
Type: CAZyme
Location: 1458019 - 1459638 (+)
Gene ID: C46_contig_1457_1196
Type: CAZyme
Location: 1459715 - 1461487 (+)
Gene ID: C46_contig_1457_1197
Type: pfam
Location: 1461560 - 1462192 (+)
Gene ID: C46_contig_1457_1198
Type: CAZyme
Location: 1462256 - 1464235 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C46_contig_1457_1196 vegetarian > omnivore 1.14926 0.01548

🧭 Explore Read Mapping of CGC

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