Cluster: C46.CMAG_1_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C46.CMAG_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C46_contig_1457 | C46_contig_1457_1013 | 1262419 | 1263330 | + | 3.A.1.1.28 |
| TC | C46_contig_1457 | C46_contig_1457_1014 | 1263333 | 1264190 | + | 3.A.1.1.28 |
| CAZyme | C46_contig_1457 | C46_contig_1457_1015 | 1264234 | 1266105 | + | GH13_31 |
| pfam | C46_contig_1457 | C46_contig_1457_1016 | 1266378 | 1267652 | - | IMS | IMS_HHH | IMS_C | HHH_5 |
| TC | C46_contig_1457 | C46_contig_1457_1017 | 1267881 | 1268828 | + | 2.A.7.3.6 |
Gene ID: C46_contig_1457_1013
Type: TC
Location: 1262419 - 1263330 (+)
Type: TC
Location: 1262419 - 1263330 (+)
Gene ID: C46_contig_1457_1014
Type: TC
Location: 1263333 - 1264190 (+)
Type: TC
Location: 1263333 - 1264190 (+)
Gene ID: C46_contig_1457_1015
Type: CAZyme
Location: 1264234 - 1266105 (+)
Type: CAZyme
Location: 1264234 - 1266105 (+)
Gene ID: C46_contig_1457_1016
Type: pfam
Location: 1266378 - 1267652 (-)
Type: pfam
Location: 1266378 - 1267652 (-)
Gene ID: C46_contig_1457_1017
Type: TC
Location: 1267881 - 1268828 (+)
Type: TC
Location: 1267881 - 1268828 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium longum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.