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Cluster: C46.CMAG_1_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C46_contig_1457 C46_contig_1457_816 1029422 1031650 + GH127
TF C46_contig_1457 C46_contig_1457_817 1031678 1032643 + HTH_AraC | HTH_AraC
TF C46_contig_1457 C46_contig_1457_818 1032815 1033972 - LacI
CAZyme C46_contig_1457 C46_contig_1457_819 1034346 1035755 + GH27
TC C46_contig_1457 C46_contig_1457_820 1036508 1038418 + 3.A.1.106.3
TC C46_contig_1457 C46_contig_1457_821 1038429 1040237 + 3.A.1.106.3
pfam C46_contig_1457 C46_contig_1457_822 1040263 1041333 - Fic
pfam C46_contig_1457 C46_contig_1457_823 1041612 1042571 + TatD_DNase
TC C46_contig_1457 C46_contig_1457_824 1042714 1045227 + 2.A.72.1.3
Gene ID: C46_contig_1457_816
Type: CAZyme
Location: 1029422 - 1031650 (+)
Gene ID: C46_contig_1457_817
Type: TF
Location: 1031678 - 1032643 (+)
Gene ID: C46_contig_1457_818
Type: TF
Location: 1032815 - 1033972 (-)
Gene ID: C46_contig_1457_819
Type: CAZyme
Location: 1034346 - 1035755 (+)
Gene ID: C46_contig_1457_820
Type: TC
Location: 1036508 - 1038418 (+)
Gene ID: C46_contig_1457_821
Type: TC
Location: 1038429 - 1040237 (+)
Gene ID: C46_contig_1457_822
Type: pfam
Location: 1040263 - 1041333 (-)
Gene ID: C46_contig_1457_823
Type: pfam
Location: 1041612 - 1042571 (+)
Gene ID: C46_contig_1457_824
Type: TC
Location: 1042714 - 1045227 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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