Cluster: C46.CMAG_1_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C46.CMAG_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C46_contig_1457 | C46_contig_1457_642 | 759097 | 761499 | - | GH146 |
| pfam | C46_contig_1457 | C46_contig_1457_643 | 762178 | 762468 | + | TatA_B_E |
| TC | C46_contig_1457 | C46_contig_1457_644 | 762465 | 763547 | + | 2.A.64.1.3 |
| pfam | C46_contig_1457 | C46_contig_1457_645 | 763549 | 763809 | + | TatA_B_E |
| TF | C46_contig_1457 | C46_contig_1457_646 | 763815 | 764864 | - | LacI |
| TC | C46_contig_1457 | C46_contig_1457_647 | 765041 | 767161 | - | 3.A.3.25.3 |
Gene ID: C46_contig_1457_642
Type: CAZyme
Location: 759097 - 761499 (-)
Type: CAZyme
Location: 759097 - 761499 (-)
Gene ID: C46_contig_1457_643
Type: pfam
Location: 762178 - 762468 (+)
Type: pfam
Location: 762178 - 762468 (+)
Gene ID: C46_contig_1457_644
Type: TC
Location: 762465 - 763547 (+)
Type: TC
Location: 762465 - 763547 (+)
Gene ID: C46_contig_1457_645
Type: pfam
Location: 763549 - 763809 (+)
Type: pfam
Location: 763549 - 763809 (+)
Gene ID: C46_contig_1457_646
Type: TF
Location: 763815 - 764864 (-)
Type: TF
Location: 763815 - 764864 (-)
Gene ID: C46_contig_1457_647
Type: TC
Location: 765041 - 767161 (-)
Type: TC
Location: 765041 - 767161 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium longum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C46_contig_1457_643 | vegan > omnivore | 1.00496 | 0.03435 |