Cluster: C46.CMAG_1_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C46.CMAG_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C46_contig_1457 | C46_contig_1457_81 | 74112 | 75002 | + | 3.A.1.15.8 |
| TC | C46_contig_1457 | C46_contig_1457_82 | 75069 | 75902 | + | 3.A.1.15.14 |
| pfam | C46_contig_1457 | C46_contig_1457_83 | 75954 | 76478 | - | YgbB |
| pfam | C46_contig_1457 | C46_contig_1457_84 | 76587 | 77180 | - | CarD_TRCF_RID | CarD_C |
| CAZyme | C46_contig_1457 | C46_contig_1457_85 | 77358 | 79610 | + | GH13_9 |
Gene ID: C46_contig_1457_81
Type: TC
Location: 74112 - 75002 (+)
Type: TC
Location: 74112 - 75002 (+)
Gene ID: C46_contig_1457_82
Type: TC
Location: 75069 - 75902 (+)
Type: TC
Location: 75069 - 75902 (+)
Gene ID: C46_contig_1457_83
Type: pfam
Location: 75954 - 76478 (-)
Type: pfam
Location: 75954 - 76478 (-)
Gene ID: C46_contig_1457_84
Type: pfam
Location: 76587 - 77180 (-)
Type: pfam
Location: 76587 - 77180 (-)
Gene ID: C46_contig_1457_85
Type: CAZyme
Location: 77358 - 79610 (+)
Type: CAZyme
Location: 77358 - 79610 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium longum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.