Cluster: C41.bin_11_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C41.bin_11
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C41_contig_43 | C41_contig_43_420 | 488437 | 489660 | - | 2.A.23.1.10 |
| NULL(UNKNOWN) | C41_contig_43 | C41_contig_43_421 | 490040 | 490984 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C41_contig_43 | C41_contig_43_422 | 490997 | 492676 | + | GH13_18 |
| TC | C41_contig_43 | C41_contig_43_423 | 492927 | 494219 | + | 2.A.49.9.2 |
Gene ID: C41_contig_43_420
Type: TC
Location: 488437 - 489660 (-)
Type: TC
Location: 488437 - 489660 (-)
Gene ID: C41_contig_43_421
Type:
Location: 490040 - 490984 (+)
Type:
Location: 490040 - 490984 (+)
Gene ID: C41_contig_43_422
Type: CAZyme
Location: 490997 - 492676 (+)
Type: CAZyme
Location: 490997 - 492676 (+)
Gene ID: C41_contig_43_423
Type: TC
Location: 492927 - 494219 (+)
Type: TC
Location: 492927 - 494219 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia tarda
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C41_contig_43_420 | vegan > omnivore | 1.11650 | 0.00924 |
| C41_contig_43_421 | vegan > omnivore | 1.25996 | 0.00924 |
| C41_contig_43_421 | vegetarian > omnivore | 1.12956 | 0.00782 |