PROTEIN: C41_contig_43_421
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Protein File & Metadata
Source:
C41_contig_43_421.pdb
Genome ID:
Protein ID:
C41_contig_43_421
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Protein Sequence
MNKYVENPSA WTAPVIPEKI PQGDMPGDKI EIGEDHINKA NLIFRELLGQ IRELKKEDAD 60 RKIVLTVCGG SGVGKSETAS LLSFYFNQIG MKAYTLSGDN YPHRIPKYND AERLHVFRES 120 AIRGMVKDGT FTKERFDIIH ERQIAGMDAD PKLKESYDWY ESYLENGKTG LRGYLGTLNE 180 IDFKEVEEIV ESFKNKEEKI WLKRMGREDT ELWYEEVDFS DTEILIIEWT HGNSDNYKGV 240 DIPVLLNSTP QETMAHRKAR NRDGAVDSPF TTMVLELEQD MLESQAHKAK VIVSKAGKLL 300 SYDEYKEIMD QGRI 314
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P11664-F1-model_v4 | 15 | 301 | 1 | 237 | 0.6517 |
0.7629 |
| AF-A0A1D8PQM3-F1-model_v4 | 35 | 296 | 8 | 226 | 0.6273 |
0.7685 |
| AF-Q9VC99-F1-model_v4 | 58 | 299 | 23 | 225 | 0.5249 |
0.7346 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QTE27753.1 | GH13 | 25 | 314 | 1 | 795 | 0.6021 |
0.9525 |
| UEG54185.1 | GH0 | 15 | 303 | 334 | 617 | 0.4668 |
0.6874 |
| AF-G4T4R7-F1-model_v4 | GH36 | 12 | 302 | 677 | 935 | 0.4628 |
0.8387 |
| AF-C4ZBZ0-F1-model_v4 | GH36 | 12 | 302 | 683 | 952 | 0.462 |
0.8072 |
| AF-A0A2Z4UA59-F1-model_v4 | GH36 | 11 | 302 | 677 | 935 | 0.4602 |
0.833 |
Structural Homologs -
CAZyme-ID50
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P11664-F1-model_v4 | 15 | 301 | 1 | 237 | 0.6517 |
0.7629 |
| AF-Q9PQF9-F1-model_v4 | 58 | 299 | 2 | 195 | 0.5989 |
0.7801 |
| AF-Q9VC99-F1-model_v4 | 58 | 299 | 23 | 225 | 0.5249 |
0.7346 |
| AF-G4T4R7-F1-model_v4 | 12 | 302 | 677 | 935 | 0.4628 |
0.8378 |