dbCAN Logo

Cluster: C41.bin_11_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C41_contig_43 C41_contig_43_1369 1557444 1558226 + 3.A.1.3.15
TC C41_contig_43 C41_contig_43_1370 1558430 1559122 + 3.A.1.3.15
TC C41_contig_43 C41_contig_43_1371 1559109 1559858 + 3.A.1.3.15
TC C41_contig_43 C41_contig_43_1372 1560177 1561436 + 9.B.18.1.3
NULL(UNKNOWN) C41_contig_43 C41_contig_43_1373 1561669 1562178 + NULL(UNKNOWN)
[View Structural Homologs]
TC C41_contig_43 C41_contig_43_1374 1562240 1564183 + 9.B.18.2.1
pfam C41_contig_43 C41_contig_43_1375 1564227 1565510 + DegT_DnrJ_EryC1
CAZyme C41_contig_43 C41_contig_43_1376 1565535 1567160 + GT2
NULL(UNKNOWN) C41_contig_43 C41_contig_43_1377 1567171 1567455 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C41_contig_43 C41_contig_43_1378 1567893 1568936 + GT4
NULL(UNKNOWN) C41_contig_43 C41_contig_43_1379 1568944 1569957 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) C41_contig_43 C41_contig_43_1380 1569944 1571191 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C41_contig_43 C41_contig_43_1381 1571223 1572218 + GT2
Gene ID: C41_contig_43_1369
Type: TC
Location: 1557444 - 1558226 (+)
Gene ID: C41_contig_43_1370
Type: TC
Location: 1558430 - 1559122 (+)
Gene ID: C41_contig_43_1371
Type: TC
Location: 1559109 - 1559858 (+)
Gene ID: C41_contig_43_1372
Type: TC
Location: 1560177 - 1561436 (+)
Gene ID: C41_contig_43_1373
Type:
Location: 1561669 - 1562178 (+)
Gene ID: C41_contig_43_1374
Type: TC
Location: 1562240 - 1564183 (+)
Gene ID: C41_contig_43_1375
Type: pfam
Location: 1564227 - 1565510 (+)
Gene ID: C41_contig_43_1376
Type: CAZyme
Location: 1565535 - 1567160 (+)
Gene ID: C41_contig_43_1377
Type:
Location: 1567171 - 1567455 (+)
Gene ID: C41_contig_43_1378
Type: CAZyme
Location: 1567893 - 1568936 (+)
Gene ID: C41_contig_43_1379
Type:
Location: 1568944 - 1569957 (+)
Gene ID: C41_contig_43_1380
Type:
Location: 1569944 - 1571191 (+)
Gene ID: C41_contig_43_1381
Type: CAZyme
Location: 1571223 - 1572218 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C41_contig_43_1369 vegetarian > omnivore 1.16978 0.00782
C41_contig_43_1370 vegan > omnivore 1.06405 0.00924
C41_contig_43_1371 vegan > omnivore 1.33114 0.00924

🧭 Explore Read Mapping of CGC

← Back to Cluster List