PROTEIN: C41_contig_43_1380
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Protein File & Metadata
Source:
C41_contig_43_1380.pdb
Genome ID:
Protein ID:
C41_contig_43_1380
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Protein Sequence
MEVNKRRFGI ISLTGAVGFF FALAPVLDPY IVVEIGSGFT LKINDIVMLF LTMLCFSKSY 60 KIERKTGFLC IWLLGLGIIG IFGNLASNTD MVNSFKNLSV WLIYAICLNY LWKTPCRDKF 120 LYWLELIAIV ASILVILQFI SGYVGISMWD GKIPGLALGK YDGWAGYIDV NTGDIRPNGI 180 FQEASYLGIY VSVAYVQAFK EEKIKRMLLY AVAMLMTTSV VAIIILITTT VMILIMKNRI 240 DLSSKMTRRI LLLIGVFIVG LVVVSNSNEA VGDSIAYIMK RFTNFNSDLN GARMSSTKYR 300 IVGHVELFNR YSIMQKMFGV GIAQYGNLFN VKSYGNVWVT TLLNCGILGV SYLIICVLNM 360 IKRIRRENIV FLVIFVLVLS SDWQWFSWYF FMLISACILS GNDNNEDFEQ RLVKN 415
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44067-F1-model_v4 | 9 | 402 | 6 | 399 | 0.6679 |
0.7127 |
| AF-X8F0V5-F1-model_v4 | 9 | 410 | 39 | 465 | 0.64 |
0.7262 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D9S8K7-F1-model_v4 | GT4 | 10 | 406 | 13 | 398 | 0.5959 |
0.8396 |
| AF-B8IGI7-F1-model_v4 | GH16_7 | 9 | 415 | 16 | 465 | 0.5764 |
0.791 |
| AF-D5MJ04-F1-model_v4 | GT9 | 10 | 415 | 26 | 559 | 0.5441 |
0.7279 |
| UII34295.1 | GT4 | 10 | 407 | 16 | 417 | 0.5389 |
0.7364 |
| AF-B5L412-F1-model_v4 | GT2 | 6 | 415 | 3 | 471 | 0.4919 |
0.6254 |
| AF-A0A5B7R2V6-F1-model_v4 | GH5_39 | 11 | 406 | 384 | 789 | 0.4623 |
0.6419 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D9S8K7 | GT4 | 10 | 406 | 13 | 398 | 0.5959 |
0.8396 |
| B8IGI7 | GH16_7 | 9 | 415 | 16 | 465 | 0.5764 |
0.791 |
| D5MJ04 | GT9 | 10 | 415 | 26 | 559 | 0.5441 |
0.7279 |
| UII34295.1 | GT4 | 10 | 407 | 16 | 417 | 0.5389 |
0.7364 |
| A0A6S6I134 | GT2 | 7 | 415 | 7 | 584 | 0.5259 |
0.753 |
| B5L412 | GT2 | 6 | 415 | 3 | 471 | 0.4919 |
0.6254 |
| A0A5B7R2V6 | GH5_39 | 11 | 406 | 384 | 789 | 0.4623 |
0.6419 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37784-F1-model_v4 | 10 | 411 | 2 | 378 | 0.7114 |
0.7701 |
| AF-P44067-F1-model_v4 | 9 | 402 | 6 | 399 | 0.6679 |
0.7127 |
| AF-Q02729-F1-model_v4 | 4 | 407 | 1 | 405 | 0.5947 |
0.6423 |