Cluster: C37.bin_6_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C37.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C37_contig_7 | C37_contig_7_484 | 474408 | 475823 | - | 9.A.11.1.1 |
| pfam | C37_contig_7 | C37_contig_7_485 | 475990 | 477390 | - | Acetyltransf_1 | LPG_synthase_C | Acetyltransf_3 |
| TF | C37_contig_7 | C37_contig_7_486 | 477461 | 478348 | - | HTH_1 |
| CAZyme | C37_contig_7 | C37_contig_7_487 | 478523 | 479245 | + | CE4 |
Gene ID: C37_contig_7_484
Type: TC
Location: 474408 - 475823 (-)
Type: TC
Location: 474408 - 475823 (-)
Gene ID: C37_contig_7_485
Type: pfam
Location: 475990 - 477390 (-)
Type: pfam
Location: 475990 - 477390 (-)
Gene ID: C37_contig_7_486
Type: TF
Location: 477461 - 478348 (-)
Type: TF
Location: 477461 - 478348 (-)
Gene ID: C37_contig_7_487
Type: CAZyme
Location: 478523 - 479245 (+)
Type: CAZyme
Location: 478523 - 479245 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola sp003522105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C37_contig_7_484 | vegetarian > vegan | 2.25860 | 0.00020 |
| C37_contig_7_485 | vegetarian > vegan | 2.43969 | 0.00020 |
| C37_contig_7_486 | vegetarian > vegan | 2.20948 | 0.00020 |
| C37_contig_7_487 | vegetarian > vegan | 1.41671 | 0.00020 |