Cluster: C37.bin_1_CGC50
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C37.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C37_contig_1551 | C37_contig_1551_1307 | 1653188 | 1655005 | + | GH2 |
| TC | C37_contig_1551 | C37_contig_1551_1308 | 1655368 | 1656618 | - | 2.A.1.2.97 |
| TC | C37_contig_1551 | C37_contig_1551_1309 | 1657013 | 1657471 | - | 3.D.7.2.3 |
| TC | C37_contig_1551 | C37_contig_1551_1310 | 1657630 | 1658424 | - | 3.D.7.2.3 |
| TC | C37_contig_1551 | C37_contig_1551_1311 | 1658439 | 1660157 | - | 3.D.7.2.3 |
| TC | C37_contig_1551 | C37_contig_1551_1312 | 1660170 | 1661354 | - | 3.D.7.2.3 |
Gene ID: C37_contig_1551_1307
Type: CAZyme
Location: 1653188 - 1655005 (+)
Type: CAZyme
Location: 1653188 - 1655005 (+)
Gene ID: C37_contig_1551_1308
Type: TC
Location: 1655368 - 1656618 (-)
Type: TC
Location: 1655368 - 1656618 (-)
Gene ID: C37_contig_1551_1309
Type: TC
Location: 1657013 - 1657471 (-)
Type: TC
Location: 1657013 - 1657471 (-)
Gene ID: C37_contig_1551_1310
Type: TC
Location: 1657630 - 1658424 (-)
Type: TC
Location: 1657630 - 1658424 (-)
Gene ID: C37_contig_1551_1311
Type: TC
Location: 1658439 - 1660157 (-)
Type: TC
Location: 1658439 - 1660157 (-)
Gene ID: C37_contig_1551_1312
Type: TC
Location: 1660170 - 1661354 (-)
Type: TC
Location: 1660170 - 1661354 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter fastidiosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.