Cluster: C37.bin_1_CGC38
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: C37.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C37_contig_1551 | C37_contig_1551_639 | 799386 | 800600 | + | GH88 |
| TC | C37_contig_1551 | C37_contig_1551_640 | 800619 | 803810 | + | 1.B.14.6.1 |
| TC | C37_contig_1551 | C37_contig_1551_641 | 803831 | 805420 | + | 8.A.46.1.3 |
| pfam | C37_contig_1551 | C37_contig_1551_642 | 805420 | 806391 | + | DUF5017 |
| CAZyme | C37_contig_1551 | C37_contig_1551_643 | 806404 | 809046 | + | PL8 |
| CAZyme | C37_contig_1551 | C37_contig_1551_644 | 809080 | 810486 | + | CE20 |
| STP | C37_contig_1551 | C37_contig_1551_645 | 810556 | 811926 | + | Pyr_redox_2 |
| CAZyme | C37_contig_1551 | C37_contig_1551_646 | 811987 | 814167 | + | PL8_3 |
| TC | C37_contig_1551 | C37_contig_1551_647 | 814343 | 815995 | - | 4.C.1.1.6 |
Gene ID: C37_contig_1551_639
Type: CAZyme
Location: 799386 - 800600 (+)
Type: CAZyme
Location: 799386 - 800600 (+)
Gene ID: C37_contig_1551_640
Type: TC
Location: 800619 - 803810 (+)
Type: TC
Location: 800619 - 803810 (+)
Gene ID: C37_contig_1551_641
Type: TC
Location: 803831 - 805420 (+)
Type: TC
Location: 803831 - 805420 (+)
Gene ID: C37_contig_1551_642
Type: pfam
Location: 805420 - 806391 (+)
Type: pfam
Location: 805420 - 806391 (+)
Gene ID: C37_contig_1551_643
Type: CAZyme
Location: 806404 - 809046 (+)
Type: CAZyme
Location: 806404 - 809046 (+)
Gene ID: C37_contig_1551_644
Type: CAZyme
Location: 809080 - 810486 (+)
Type: CAZyme
Location: 809080 - 810486 (+)
Gene ID: C37_contig_1551_645
Type: STP
Location: 810556 - 811926 (+)
Type: STP
Location: 810556 - 811926 (+)
Gene ID: C37_contig_1551_646
Type: CAZyme
Location: 811987 - 814167 (+)
Type: CAZyme
Location: 811987 - 814167 (+)
Gene ID: C37_contig_1551_647
Type: TC
Location: 814343 - 815995 (-)
Type: TC
Location: 814343 - 815995 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter fastidiosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.