Cluster: C37.bin_1_CGC10
🧬 Cluster Details
- Gene Count: 22
- CAZyme Count: 13
- Substrate:
- Genome ID: C37.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C37_contig_781 | C37_contig_781_352 | 449440 | 450762 | - | GH99 |
| TC | C37_contig_781 | C37_contig_781_353 | 450804 | 452744 | - | 8.A.46.2.1 |
| TC | C37_contig_781 | C37_contig_781_354 | 452760 | 456089 | - | 1.B.14.6.2 |
| NULL(UNKNOWN) | C37_contig_781 | C37_contig_781_355 | 456322 | 458469 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C37_contig_781 | C37_contig_781_356 | 459418 | 461625 | - | GH3 |
| CAZyme | C37_contig_781 | C37_contig_781_357 | 461988 | 464270 | - | GH89 |
| NULL(UNKNOWN) | C37_contig_781 | C37_contig_781_358 | 464278 | 465969 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C37_contig_781 | C37_contig_781_359 | 465998 | 467362 | - | GH29 |
| NULL(UNKNOWN) | C37_contig_781 | C37_contig_781_360 | 467448 | 467801 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C37_contig_781 | C37_contig_781_361 | 467846 | 470509 | - | PL15 |
| CAZyme | C37_contig_781 | C37_contig_781_362 | 470703 | 472247 | - | GH29 |
| CAZyme | C37_contig_781 | C37_contig_781_363 | 472260 | 473732 | - | GH29 |
| NULL(UNKNOWN) | C37_contig_781 | C37_contig_781_364 | 474329 | 474457 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | C37_contig_781 | C37_contig_781_365 | 474512 | 475390 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C37_contig_781 | C37_contig_781_366 | 475436 | 476635 | + | GH88 |
| sulfatase | C37_contig_781 | C37_contig_781_367 | 476637 | 478037 | + | S1_14 |
| CAZyme | C37_contig_781 | C37_contig_781_368 | 478049 | 479992 | + | GH97 |
| CAZyme | C37_contig_781 | C37_contig_781_369 | 480070 | 481347 | + | GH88 |
| CAZyme | C37_contig_781 | C37_contig_781_370 | 481467 | 483407 | + | GH97 |
| CAZyme | C37_contig_781 | C37_contig_781_371 | 483532 | 485679 | + | GH31_14 |
| CAZyme | C37_contig_781 | C37_contig_781_372 | 486288 | 487715 | - | CE20 |
| TC | C37_contig_781 | C37_contig_781_373 | 487722 | 488984 | - | 2.A.1.7.18 |
Gene ID: C37_contig_781_352
Type: CAZyme
Location: 449440 - 450762 (-)
Type: CAZyme
Location: 449440 - 450762 (-)
Gene ID: C37_contig_781_353
Type: TC
Location: 450804 - 452744 (-)
Type: TC
Location: 450804 - 452744 (-)
Gene ID: C37_contig_781_354
Type: TC
Location: 452760 - 456089 (-)
Type: TC
Location: 452760 - 456089 (-)
Gene ID: C37_contig_781_355
Type:
Location: 456322 - 458469 (-)
Type:
Location: 456322 - 458469 (-)
Gene ID: C37_contig_781_356
Type: CAZyme
Location: 459418 - 461625 (-)
Type: CAZyme
Location: 459418 - 461625 (-)
Gene ID: C37_contig_781_357
Type: CAZyme
Location: 461988 - 464270 (-)
Type: CAZyme
Location: 461988 - 464270 (-)
Gene ID: C37_contig_781_358
Type:
Location: 464278 - 465969 (-)
Type:
Location: 464278 - 465969 (-)
Gene ID: C37_contig_781_359
Type: CAZyme
Location: 465998 - 467362 (-)
Type: CAZyme
Location: 465998 - 467362 (-)
Gene ID: C37_contig_781_360
Type:
Location: 467448 - 467801 (-)
Type:
Location: 467448 - 467801 (-)
Gene ID: C37_contig_781_361
Type: CAZyme
Location: 467846 - 470509 (-)
Type: CAZyme
Location: 467846 - 470509 (-)
Gene ID: C37_contig_781_362
Type: CAZyme
Location: 470703 - 472247 (-)
Type: CAZyme
Location: 470703 - 472247 (-)
Gene ID: C37_contig_781_363
Type: CAZyme
Location: 472260 - 473732 (-)
Type: CAZyme
Location: 472260 - 473732 (-)
Gene ID: C37_contig_781_364
Type:
Location: 474329 - 474457 (-)
Type:
Location: 474329 - 474457 (-)
Gene ID: C37_contig_781_365
Type:
Location: 474512 - 475390 (+)
Type:
Location: 474512 - 475390 (+)
Gene ID: C37_contig_781_366
Type: CAZyme
Location: 475436 - 476635 (+)
Type: CAZyme
Location: 475436 - 476635 (+)
Gene ID: C37_contig_781_367
Type: sulfatase
Location: 476637 - 478037 (+)
Type: sulfatase
Location: 476637 - 478037 (+)
Gene ID: C37_contig_781_368
Type: CAZyme
Location: 478049 - 479992 (+)
Type: CAZyme
Location: 478049 - 479992 (+)
Gene ID: C37_contig_781_369
Type: CAZyme
Location: 480070 - 481347 (+)
Type: CAZyme
Location: 480070 - 481347 (+)
Gene ID: C37_contig_781_370
Type: CAZyme
Location: 481467 - 483407 (+)
Type: CAZyme
Location: 481467 - 483407 (+)
Gene ID: C37_contig_781_371
Type: CAZyme
Location: 483532 - 485679 (+)
Type: CAZyme
Location: 483532 - 485679 (+)
Gene ID: C37_contig_781_372
Type: CAZyme
Location: 486288 - 487715 (-)
Type: CAZyme
Location: 486288 - 487715 (-)
Gene ID: C37_contig_781_373
Type: TC
Location: 487722 - 488984 (-)
Type: TC
Location: 487722 - 488984 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter fastidiosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.